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Adaptive dynamical networks
It is a fundamental challenge to understand how the function of a network is related to its
structural organization. Adaptive dynamical networks represent a broad class of systems that …
structural organization. Adaptive dynamical networks represent a broad class of systems that …
Keystone taxa as drivers of microbiome structure and functioning
Microorganisms have a pivotal role in the functioning of ecosystems. Recent studies have
shown that microbial communities harbour keystone taxa, which drive community …
shown that microbial communities harbour keystone taxa, which drive community …
ggClusterNet: An R package for microbiome network analysis and modularity‐based multiple network layouts
The network analysis has attracted increasing attention and interest from ecological
academics, thus it is of great necessity to develop more convenient and powerful tools. For …
academics, thus it is of great necessity to develop more convenient and powerful tools. For …
Network neuroscience
Despite substantial recent progress, our understanding of the principles and mechanisms
underlying complex brain function and cognition remains incomplete. Network neuroscience …
underlying complex brain function and cognition remains incomplete. Network neuroscience …
[HTML][HTML] Cautionary notes on the use of co-occurrence networks in soil ecology
M Goberna, M Verdú - Soil Biology and Biochemistry, 2022 - Elsevier
Soil ecology is witnessing exponential growth in the number of studies using co-occurrence
network analysis. Researchers reconstruct networks based on the co-occurrence of taxa or …
network analysis. Researchers reconstruct networks based on the co-occurrence of taxa or …
[HTML][HTML] Network analysis methods for studying microbial communities: A mini review
MS Matchado, M Lauber, S Reitmeier… - Computational and …, 2021 - Elsevier
Microorganisms including bacteria, fungi, viruses, protists and archaea live as communities
in complex and contiguous environments. They engage in numerous inter-and intra …
in complex and contiguous environments. They engage in numerous inter-and intra …
Global airborne bacterial community—interactions with Earth's microbiomes and anthropogenic activities
Airborne bacteria are an influential component of the Earth's microbiomes, but their
community structure and biogeographic distribution patterns have yet to be understood. We …
community structure and biogeographic distribution patterns have yet to be understood. We …
Disentangling interactions in the microbiome: a network perspective
Microbiota are now widely recognized as being central players in the health of all organisms
and ecosystems, and subsequently have been the subject of intense study. However …
and ecosystems, and subsequently have been the subject of intense study. However …
The interconnected rhizosphere: high network complexity dominates rhizosphere assemblages
While interactions between roots and microorganisms have been intensively studied, we
know little about interactions among root‐associated microbes. We used random matrix …
know little about interactions among root‐associated microbes. We used random matrix …
Linking soil fungi to bacterial community assembly in arid ecosystems
Revealing the roles of biotic factors in driving community assembly, which is crucial for the
understanding of biodiversity and ecosystem functions, is a fundamental but infrequently …
understanding of biodiversity and ecosystem functions, is a fundamental but infrequently …