Using genetic data to strengthen causal inference in observational research

JB **ault, PF O'reilly, T Schoeler… - Nature Reviews …, 2018 - nature.com
Causal inference is essential across the biomedical, behavioural and social sciences. By
progressing from confounded statistical associations to evidence of causal relationships …

Advantages and pitfalls in the application of mixed-model association methods

J Yang, NA Zaitlen, ME Goddard, PM Visscher… - Nature …, 2014 - nature.com
Mixed linear models are emerging as a method of choice for conducting genetic association
studies in humans and other organisms. The advantages of the mixed-linear-model …

Efficient Bayesian mixed-model analysis increases association power in large cohorts

PR Loh, G Tucker, BK Bulik-Sullivan, BJ Vilhjálmsson… - Nature …, 2015 - nature.com
Linear mixed models are a powerful statistical tool for identifying genetic associations and
avoiding confounding. However, existing methods are computationally intractable in large …

Genome-wide association meta-analysis highlights light-induced signaling as a driver for refractive error

MS Tedja, R Wojciechowski, PG Hysi, N Eriksson… - Nature …, 2018 - nature.com
Refractive errors, including myopia, are the most frequent eye disorders worldwide and an
increasingly common cause of blindness. This genome-wide association meta-analysis in …

Fast and accurate genotype imputation in genome-wide association studies through pre-phasing

B Howie, C Fuchsberger, M Stephens, J Marchini… - Nature …, 2012 - nature.com
Abstract The 1000 Genomes Project and disease-specific sequencing efforts are producing
large collections of haplotypes that can be used as reference panels for genotype imputation …

Robust relationship inference in genome-wide association studies

A Manichaikul, JC Mychaleckyj, SS Rich, K Daly… - …, 2010 - academic.oup.com
Motivation: Genome-wide association studies (GWASs) have been widely used to map loci
contributing to variation in complex traits and risk of diseases in humans. Accurate …

Variance component model to account for sample structure in genome-wide association studies

HM Kang, JH Sul, SK Service, NA Zaitlen, S Kong… - Nature …, 2010 - nature.com
Although genome-wide association studies (GWASs) have identified numerous loci
associated with complex traits, imprecise modeling of the genetic relatedness within study …

Map** cis- and trans-regulatory effects across multiple tissues in twins

E Grundberg, KS Small, ÅK Hedman, AC Nica, A Buil… - Nature …, 2012 - nature.com
Sequence-based variation in gene expression is a key driver of disease risk. Common
variants regulating expression in cis have been mapped in many expression quantitative …

Common genetic determinants of vitamin D insufficiency: a genome-wide association study

TJ Wang, F Zhang, JB Richards, B Kestenbaum… - The Lancet, 2010 - thelancet.com
Background Vitamin D is crucial for maintenance of musculoskeletal health, and might also
have a role in extraskeletal tissues. Determinants of circulating 25-hydroxyvitamin D …

A thrifty variant in CREBRF strongly influences body mass index in Samoans

RL Minster, NL Hawley, CT Su, G Sun, EE Kershaw… - Nature …, 2016 - nature.com
Samoans are a unique founder population with a high prevalence of obesity,,, making them
well suited for identifying new genetic contributors to obesity. We conducted a genome-wide …