What are fungal species and how to delineate them?

KWT Chethana, IS Manawasinghe, VG Hurdeal… - Fungal Diversity, 2021 - Springer
This is the opening paper in the special issue of Fungal Diversity, which collates the data on
defining species. Defining and recognizing species has long been a controversial issue …

Best practices in metabarcoding of fungi: from experimental design to results

L Tedersoo, M Bahram, L Zinger, RH Nilsson… - Molecular …, 2022 - Wiley Online Library
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …

[HTML][HTML] Fusarium: more than a node or a foot-shaped basal cell

PW Crous, L Lombard, M Sandoval-Denis, KA Seifert… - Studies in mycology, 2021 - Elsevier
Recent publications have argued that there are potentially serious consequences for
researchers in recognising distinct genera in the terminal fusarioid clade of the family …

Mycobiome diversity: high-throughput sequencing and identification of fungi

RH Nilsson, S Anslan, M Bahram… - Nature Reviews …, 2019 - nature.com
Fungi are major ecological players in both terrestrial and aquatic environments by cycling
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …

Fungal identification using molecular tools: a primer for the natural products research community

HA Raja, AN Miller, CJ Pearce… - Journal of natural …, 2017 - ACS Publications
Fungi are morphologically, ecologically, metabolically, and phylogenetically diverse. They
are known to produce numerous bioactive molecules, which makes them very useful for …

The Global Soil Mycobiome consortium dataset for boosting fungal diversity research

L Tedersoo, V Mikryukov, S Anslan, M Bahram… - Fungal Diversity, 2021 - Springer
Fungi are highly important biotic components of terrestrial ecosystems, but we still have a
very limited understanding about their diversity and distribution. This data article releases a …

Towards a unified paradigm for sequence‐based identification of fungi

U Kõljalg, RH Nilsson, K Abarenkov, L Tedersoo… - 2013 - Wiley Online Library
The nuclear ribosomal internal transcribed spacer (ITS) region is the formal fungal barcode
and in most cases the marker of choice for the exploration of fungal diversity in …

Forgotten fungi—the gut mycobiome in human health and disease

CE Huseyin, PW O'Toole, PD Cotter… - FEMS Microbiology …, 2017 - academic.oup.com
The human body is home to a complex and diverse microbial ecosystem that plays a central
role in host health. This includes a diversity of fungal species that is collectively referred to …

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi

CL Schoch, B Robbertse, V Robert, D Vu… - Database, 2014 - academic.oup.com
DNA phylogenetic comparisons have shown that morphology-based species recognition
often underestimates fungal diversity. Therefore, the need for accurate DNA sequence data …

One stop shop: backbones trees for important phytopathogenic genera: I (2014)

KD Hyde, RH Nilsson, SA Alias, HA Ariyawansa… - Fungal Diversity, 2014 - Springer
Many fungi are pathogenic on plants and cause significant damage in agriculture and
forestry. They are also part of the natural ecosystem and may play a role in regulating plant …