[HTML][HTML] Advances and trends in omics technology development

X Dai, L Shen - Frontiers in Medicine, 2022 - frontiersin.org
The human history has witnessed the rapid development of technologies such as high-
throughput sequencing and mass spectrometry that led to the concept of 'omics' and …

Gene editing and CRISPR in the clinic: current and future perspectives

MP Hirakawa, R Krishnakumar, JA Timlin… - Bioscience …, 2020 - portlandpress.com
Genome editing technologies, particularly those based on zinc-finger nucleases (ZFNs),
transcription activator-like effector nucleases (TALENs), and CRISPR (clustered regularly …

CRISPR RNA-guided integrases for high-efficiency, multiplexed bacterial genome engineering

PLH Vo, C Ronda, SE Klompe, EE Chen, C Acree… - Nature …, 2021 - nature.com
Existing technologies for site-specific integration of kilobase-sized DNA sequences in
bacteria are limited by low efficiency, a reliance on recombination, the need for multiple …

High-throughput continuous evolution of compact Cas9 variants targeting single-nucleotide-pyrimidine PAMs

TP Huang, ZJ Heins, SM Miller, BG Wong… - Nature …, 2023 - nature.com
Despite the availability of Cas9 variants with varied protospacer-adjacent motif (PAM)
compatibilities, some genomic loci—especially those with pyrimidine-rich PAM sequences …

Increasing the specificity of CRISPR systems with engineered RNA secondary structures

DD Kocak, EA Josephs, V Bhandarkar, SS Adkar… - Nature …, 2019 - nature.com
CRISPR (clustered regularly interspaced short palindromic repeat) systems have been
broadly adopted for basic science, biotechnology, and gene and cell therapy. In some …

Noncanonical crRNAs derived from host transcripts enable multiplexable RNA detection by Cas9

C Jiao, S Sharma, G Dugar, NL Peeck, T Bischler… - Science, 2021 - science.org
CRISPR-Cas systems recognize foreign genetic material using CRISPR RNAs (crRNAs). In
type II systems, a trans-activating crRNA (tracrRNA) hybridizes to crRNAs to drive their …

Selective TnsC recruitment enhances the fidelity of RNA-guided transposition

FT Hoffmann, M Kim, LY Beh, J Wang, PLH Vo… - Nature, 2022 - nature.com
Bacterial transposons are pervasive mobile genetic elements that use distinct DNA-binding
proteins for horizontal transmission. For example, Escherichia coli Tn 7 homes to a specific …

CRISPR-Cas3 induces broad and unidirectional genome editing in human cells

H Morisaka, K Yoshimi, Y Okuzaki, P Gee… - Nature …, 2019 - nature.com
Although single-component Class 2 CRISPR systems, such as type II Cas9 or type V
Cas12a (Cpf1), are widely used for genome editing in eukaryotic cells, the application of …

Massively parallel kinetic profiling of natural and engineered CRISPR nucleases

SK Jones, JA Hawkins, NV Johnson, C Jung, K Hu… - Biophysical …, 2021 - cell.com
Engineered SpCas9s and AsCas12a cleave fewer off-target genomic sites than natural
SpCas9. However, understanding their fidelity, mechanisms and cleavage outcomes …

Harnessing type I CRISPR–Cas systems for genome engineering in human cells

P Cameron, MM Coons, SE Klompe, AM Lied… - Nature …, 2019 - nature.com
Abstract Type I CRISPR–Cas systems are the most abundant adaptive immune systems in
bacteria and archaea,. Target interference relies on a multi-subunit, RNA-guided complex …