[HTML][HTML] Pursuing excitonic energy transfer with programmable DNA-based optical breadboards
DNA nanotechnology has now enabled the self-assembly of almost any prescribed 3-
dimensional nanoscale structure in large numbers and with high fidelity. These structures …
dimensional nanoscale structure in large numbers and with high fidelity. These structures …
Using transition density models to interpret experimental optical spectra of exciton-coupled cyanine (iCy3)2 dimer probes of local DNA conformations at or near …
D Heussman, L Enkhbaatar, MI Sorour… - Nucleic Acids …, 2024 - academic.oup.com
Exciton-coupled chromophore dimers are an emerging class of optical probes for studies of
site-specific biomolecular interactions. Applying accurate theoretical models for the …
site-specific biomolecular interactions. Applying accurate theoretical models for the …
Influence of hydrophobicity on excitonic coupling in DNA-templated indolenine squaraine dye aggregates
OA Mass, CK Wilson, G Barcenas… - The Journal of …, 2022 - ACS Publications
Control over the strength of excitonic coupling in molecular dye aggregates is a substantial
factor for the development of technologies such as light harvesting, optoelectronics, and …
factor for the development of technologies such as light harvesting, optoelectronics, and …
Studies of DNA 'Breathing' by Polarization-Sweep Single-Molecule Fluorescence Microscopy of Exciton-Coupled (iCy3)2 Dimer-Labeled DNA Fork Constructs
J Maurer, CS Albrecht, P Herbert… - The Journal of …, 2023 - ACS Publications
Local fluctuations of the sugar–phosphate backbones and bases of DNA (often called DNA
'breathing') play a variety of critical roles in controlling the functional interactions of the DNA …
'breathing') play a variety of critical roles in controlling the functional interactions of the DNA …
Tuning optical absorption and emission using strongly coupled dimers in programmable DNA scaffolds
Molecular materials for light harvesting, computing, and fluorescence imaging require
nanoscale integration of electronically active subunits. Variation in the optical absorption …
nanoscale integration of electronically active subunits. Variation in the optical absorption …
Tuning between quenching and energy transfer in DNA-templated heterodimer aggregates
AU Chowdhury, SA Díaz, JS Huff… - The Journal of …, 2022 - ACS Publications
Molecular excitons, which propagate spatially via electronic energy transfer, are central to
numerous applications including light harvesting, organic optoelectronics, and nanoscale …
numerous applications including light harvesting, organic optoelectronics, and nanoscale …
Exciton delocalization and scaffold stability in bridged nucleotide-substituted, DNA duplex-templated cyanine aggregates
SK Roy, OA Mass, DL Kellis, CK Wilson… - The Journal of …, 2021 - ACS Publications
Molecular excitons play a foundational role in chromophore aggregates found in light-
harvesting systems and offer potential applications in engineered excitonic systems …
harvesting systems and offer potential applications in engineered excitonic systems …
Synthesis of substituted Cy5 phosphoramidite derivatives and their incorporation into oligonucleotides using automated DNA synthesis
A Meares, K Susumu, D Mathur, SH Lee, OA Mass… - ACS …, 2022 - ACS Publications
Cyanine dyes represent a family of organic fluorophores with widespread utility in biological-
based applications ranging from real-time PCR probes to protein labeling. One burgeoning …
based applications ranging from real-time PCR probes to protein labeling. One burgeoning …
Tunable electronic structure via DNA-templated heteroaggregates of two distinct cyanine dyes
JS Huff, SA Díaz, MS Barclay… - The Journal of …, 2022 - ACS Publications
Molecular excitons are useful for applications in light harvesting, organic optoelectronics,
and nanoscale computing. Electronic energy transfer (EET) is a process central to the …
and nanoscale computing. Electronic energy transfer (EET) is a process central to the …
Towards control of excitonic coupling in DNA-templated Cy5 aggregates: the principal role of chemical substituent hydrophobicity and steric interactions
Understanding and controlling exciton coupling in dye aggregates has become a greater
focus as potential applications such as coherent exciton devices, nanophotonics, and …
focus as potential applications such as coherent exciton devices, nanophotonics, and …