[HTML][HTML] FoldX as protein engineering tool: better than random based approaches?

O Buß, J Rudat, K Ochsenreither - Computational and structural …, 2018 - Elsevier
Improving protein stability is an important goal for basic research as well as for clinical and
industrial applications but no commonly accepted and widely used strategy for efficient …

Tutorial: guidelines for the experimental design of single-cell RNA sequencing studies

A Lafzi, C Moutinho, S Picelli, H Heyn - Nature protocols, 2018 - nature.com
Single-cell RNA sequencing is at the forefront of high-resolution phenoty** experiments
for complex samples. Although this methodology requires specialized equipment and …

Full-length RNA-seq from single cells using Smart-seq2

S Picelli, OR Faridani, ÅK Björklund, G Winberg… - Nature protocols, 2014 - nature.com
Emerging methods for the accurate quantification of gene expression in individual cells hold
promise for revealing the extent, function and origins of cell-to-cell variability. Different high …

Discovery of a cytokine and its receptor by functional screening of the extracellular proteome

H Lin, E Lee, K Hestir, C Leo, M Huang, E Bosch… - Science, 2008 - science.org
To understand the system of secreted proteins and receptors involved in cell-cell signaling,
we produced a comprehensive set of recombinant secreted proteins and the extracellular …

Why Is Trehalose an Exceptional Protein Stabilizer?: An analysis of the thermal stability of proteins in the presence of the compatible osmolyte trehalose

JK Kaushik, R Bhat - Journal of Biological Chemistry, 2003 - ASBMB
Trehalose, a naturally occurring osmolyte, is known to be an exceptional stabilizer of
proteins and helps retain the activity of enzymes in solution as well as in the freeze-dried …

Functional annotation of a full-length mouse cDNA collection

General organizer Hayashizaki Y. yosihide@ gsc. riken … - Nature, 2001 - nature.com
Abstract The RIKEN Mouse Gene Encyclopaedia Project, a systematic approach to
determining the full coding potential of the mouse genome, involves collection and …

Metabolic and gene expression changes triggered by nitrogen deprivation in the photoautotrophically grown microalgae Chlamydomonas reinhardtii and Coccomyxa …

J Msanne, D Xu, AR Konda, JA Casas-Mollano… - Phytochemistry, 2012 - Elsevier
Microalgae are emerging as suitable feedstocks for renewable biofuel production.
Characterizing the metabolic pathways involved in the biosynthesis of energy-rich …

Single-cell RNA-sequencing: the future of genome biology is now

S Picelli - RNA biology, 2017 - Taylor & Francis
Genome-wide single-cell analysis represents the ultimate frontier of genomics research. In
particular, single-cell RNA-sequencing (scRNA-seq) studies have been boosted in the last …

Functional Annotation of a Full-Length Arabidopsis cDNA Collection

M Seki, M Narusaka, A Kamiya, J Ishida, M Satou… - Science, 2002 - science.org
Full-length complementary DNAs (cDNAs) are essential for the correct annotation of
genomic sequences and for the functional analysis of genes and their products. We isolated …

[HTML][HTML] Trehalose protects against oxidative stress by regulating the Keap1–Nrf2 and autophagy pathways

Y Mizunoe, M Kobayashi, Y Sudo, S Watanabe… - Redox biology, 2018 - Elsevier
Dysfunction of autophagy, which regulates cellular homeostasis by degrading organelles
and proteins, is associated with pathogenesis of various diseases such as cancer …