Resolving genetic heterogeneity in cancer

S Turajlic, A Sottoriva, T Graham… - Nature Reviews Genetics, 2019 - nature.com
To a large extent, cancer conforms to evolutionary rules defined by the rates at which clones
mutate, adapt and grow. Next-generation sequencing has provided a snapshot of the …

Cancer evolution: Darwin and beyond

R Vendramin, K Litchfield, C Swanton - The EMBO journal, 2021 - embopress.org
Clinical and laboratory studies over recent decades have established branched evolution as
a feature of cancer. However, while grounded in somatic selection, several lines of evidence …

[HTML][HTML] The evolution of lung cancer and impact of subclonal selection in TRACERx

AM Frankell, M Dietzen, M Al Bakir, EL Lim, T Karasaki… - Nature, 2023 - nature.com
Lung cancer is the leading cause of cancer-associated mortality worldwide. Here we
analysed 1,644 tumour regions sampled at surgery or during follow-up from the first 421 …

Genetic and non-genetic clonal diversity in cancer evolution

JRM Black, N McGranahan - Nature Reviews Cancer, 2021 - nature.com
The observation and analysis of intra-tumour heterogeneity (ITH), particularly in genomic
studies, has advanced our understanding of the evolutionary forces that shape cancer …

Pervasive chromosomal instability and karyotype order in tumour evolution

TBK Watkins, EL Lim, M Petkovic, S Elizalde… - Nature, 2020 - nature.com
Chromosomal instability in cancer consists of dynamic changes to the number and structure
of chromosomes,. The resulting diversity in somatic copy number alterations (SCNAs) may …

A practical guide to cancer subclonal reconstruction from DNA sequencing

M Tarabichi, A Salcedo, AG Deshwar… - Nature …, 2021 - nature.com
Subclonal reconstruction from bulk tumor DNA sequencing has become a pillar of cancer
evolution studies, providing insight into the clonality and relative ordering of mutations and …

Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes

SC Dentro, I Leshchiner, K Haase, M Tarabichi… - Cell, 2021 - cell.com
Intra-tumor heterogeneity (ITH) is a mechanism of therapeutic resistance and therefore an
important clinical challenge. However, the extent, origin, and drivers of ITH across cancer …

Tumour immunotherapy: lessons from predator–prey theory

PT Hamilton, BR Anholt, BH Nelson - Nature Reviews Immunology, 2022 - nature.com
With the burgeoning use of immune-based treatments for cancer, never has there been a
greater need to understand the tumour microenvironment within which immune cells …

Tumour heterogeneity and the evolutionary trade-offs of cancer

J Hausser, U Alon - Nature Reviews Cancer, 2020 - nature.com
Tumours vary in gene expression programmes and genetic alterations. Understanding this
diversity and its biological meaning requires a theoretical framework, which could in turn …

Deep whole-genome analysis of 494 hepatocellular carcinomas

L Chen, C Zhang, R Xue, M Liu, J Bai, J Bao, Y Wang… - Nature, 2024 - nature.com
Over half of hepatocellular carcinoma (HCC) cases diagnosed worldwide are in China,–.
However, whole-genome analysis of hepatitis B virus (HBV)-associated HCC in Chinese …