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The rebirth of culture in microbiology through the example of culturomics to study human gut microbiota
JC Lagier, P Hugon, S Khelaifia… - Clinical microbiology …, 2015 - journals.asm.org
Bacterial culture was the first method used to describe the human microbiota, but this
method is considered outdated by many researchers. Metagenomics studies have since …
method is considered outdated by many researchers. Metagenomics studies have since …
Environmental factors sha** the ecological niches of ammonia-oxidizing archaea
For more than 100 years it was believed that bacteria were the only group responsible for
the oxidation of ammonia. However, recently, a new strain of archaea bearing a putative …
the oxidation of ammonia. However, recently, a new strain of archaea bearing a putative …
iTRAQ quantitative proteomic analysis reveals the pathways for methanation of propionate facilitated by magnetite
Methanation of propionate requires syntrophic interaction of propionate-oxidizing bacteria
and hydrogenotrophic methanogens, which is referred to as interspecies electron transfer …
and hydrogenotrophic methanogens, which is referred to as interspecies electron transfer …
Planctomycetes as host-associated bacteria: a perspective that holds promise for their future isolations, by mimicking their native environmental niches in clinical …
OD Kaboré, S Godreuil, M Drancourt - Frontiers in Cellular and …, 2020 - frontiersin.org
Traditionally recognized as environmental bacteria, Planctomycetes have just been linked
recently to human pathology as opportunistic pathogens, arousing a great interest for clinical …
recently to human pathology as opportunistic pathogens, arousing a great interest for clinical …
Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454 …
M Kröber, T Bekel, NN Diaz, A Goesmann… - Journal of …, 2009 - Elsevier
The phylogenetic structure of the microbial community residing in a fermentation sample
from a production-scale biogas plant fed with maize silage, green rye and liquid manure was …
from a production-scale biogas plant fed with maize silage, green rye and liquid manure was …
Tracing the fate of microplastic carbon in the aquatic food web by compound-specific isotope analysis
Increasing abundance of microplastics (MP) in marine and freshwaters is currently one of
the greatest environmental concerns. Since plastics are fairly resistant to chemical …
the greatest environmental concerns. Since plastics are fairly resistant to chemical …
Sustained bauxite residue rehabilitation with gypsum and organic matter 16 years after initial treatment
Bauxite residue is a high volume byproduct of alumina manufacture which is commonly
disposed of in purpose-built bauxite residue disposal areas (BRDAs). Natural waters …
disposed of in purpose-built bauxite residue disposal areas (BRDAs). Natural waters …
Candidatus Syntrophosphaera thermopropionivorans: a novel player in syntrophic propionate oxidation during anaerobic digestion
S Dyksma, C Gallert - Environmental microbiology reports, 2019 - Wiley Online Library
Propionate is an important intermediate in the anaerobic mineralization of organic matter. In
methanogenic environments, its degradation relies on syntrophic associations between …
methanogenic environments, its degradation relies on syntrophic associations between …
Phycisphaera mikurensis gen. nov., sp. nov., isolated from a marine alga, and proposal of Phycisphaeraceae fam. nov., Phycisphaerales ord. nov. and Phycisphaerae …
Y Fukunaga, M Kurahashi, Y Sakiyama… - The Journal of general …, 2009 - jstage.jst.go.jp
Three strains, FYK2301M01T, FYK2301M18 and FYK2301M52, all being Gram-negative,
spherical, motile and facultatively anaerobic, were isolated from a marine alga (Porphyra …
spherical, motile and facultatively anaerobic, were isolated from a marine alga (Porphyra …
The Planctomycetia: an overview of the currently largest class within the phylum Planctomycetes
The phylum Planctomycetes comprises bacteria with uncommon features among
prokaryotes, such as cell division by budding, absence of the bacterial tubulin-homolog cell …
prokaryotes, such as cell division by budding, absence of the bacterial tubulin-homolog cell …