Macrocyclic peptides as drug candidates: recent progress and remaining challenges

AA Vinogradov, Y Yin, H Suga - Journal of the American Chemical …, 2019 - ACS Publications
Peptides as a therapeutic modality attract much attention due to their synthetic accessibility,
high degree of specific binding, and the ability to target protein surfaces traditionally …

Synthesis and applications of mirror-image proteins

K Harrison, AS Mackay, L Kambanis… - Nature Reviews …, 2023 - nature.com
The homochirality of biomolecules in nature, such as DNA, RNA, peptides and proteins, has
played a critical role in establishing and sustaining life on Earth. This chiral bias has also …

The RaPID platform for the discovery of pseudo-natural macrocyclic peptides

Y Goto, H Suga - Accounts of Chemical Research, 2021 - ACS Publications
Conspectus Although macrocyclic peptides bearing exotic building blocks have proven their
utility as pharmaceuticals, the sources of macrocyclic peptide drugs have been largely …

Adding α, α-disubstituted and β-linked monomers to the genetic code of an organism

DL Dunkelmann, C Piedrafita, A Dickson, KC Liu… - Nature, 2024 - nature.com
The genetic code of living cells has been reprogrammed to enable the site-specific
incorporation of hundreds of non-canonical amino acids into proteins, and the encoded …

Genetic code expansion: a brief history and perspective

MA Shandell, Z Tan, VW Cornish - Biochemistry, 2021 - ACS Publications
Since the establishment of site-specific mutagenesis of single amino acids to interrogate
protein function in the 1970s, biochemists have sought to tailor protein structure in the native …

RNA display methods for the discovery of bioactive macrocycles

Y Huang, MM Wiedmann, H Suga - Chemical reviews, 2018 - ACS Publications
The past two decades have witnessed the emergence of macrocycles, including macrocyclic
peptides, as a promising yet underexploited class of de novo drug candidates. Both …

Ribosomal synthesis and de novo discovery of bioactive foldamer peptides containing cyclic β-amino acids

T Katoh, T Sengoku, K Hirata, K Ogata, H Suga - Nature Chemistry, 2020 - nature.com
Peptides that contain β-amino acids display stable secondary structures, such as helices
and sheets, and are often referred to as foldamers. Cyclic β2, 3-amino acids (cβAAs), such …

Ultra-large chemical libraries for the discovery of high-affinity peptide binders

AJ Quartararo, ZP Gates, BA Somsen… - Nature …, 2020 - nature.com
High-diversity genetically-encoded combinatorial libraries (108− 1013 members) are a rich
source of peptide-based binding molecules, identified by affinity selection. Synthetic libraries …

Ribosome-mediated polymerization of long chain carbon and cyclic amino acids into peptides in vitro

J Lee, KJ Schwarz, DS Kim, JS Moore… - Nature …, 2020 - nature.com
Ribosome-mediated polymerization of backbone-extended monomers into polypeptides is
challenging due to their poor compatibility with the translation apparatus, which evolved to …

In vitro genetic code reprogramming for the expansion of usable noncanonical amino acids

T Katoh, H Suga - Annual Review of Biochemistry, 2022 - annualreviews.org
Genetic code reprogramming has enabled us to ribosomally incorporate various
nonproteinogenic amino acids (npAAs) into peptides in vitro. The repertoire of usable npAAs …