[HTML][HTML] Concepts in Boolean network modeling: What do they all mean?

JD Schwab, SD Kühlwein, N Ikonomi, M Kühl… - Computational and …, 2020 - Elsevier
Boolean network models are one of the simplest models to study complex dynamic behavior
in biological systems. They can be applied to unravel the mechanisms regulating the …

The past, present, and future of artificial life

W Aguilar, G Santamaría-Bonfil, T Froese… - Frontiers in Robotics …, 2014 - frontiersin.org
For millennia people have wondered what makes the living different from the non-living.
Beginning in the mid-1980s, artificial life has studied living systems using a synthetic …

[图书][B] Dynamical processes on complex networks

A Barrat, M Barthelemy, A Vespignani - 2008 - books.google.com
The availability of large data sets has allowed researchers to uncover complex properties
such as large-scale fluctuations and heterogeneities in many networks, leading to the …

[图书][B] Complexity explained

P Érdi - 2008 - Springer
This book is, of course about complexity. The title of the book, as you may recognize was
motivated (excuse me for using this very mild expression) by Daniel Dennett's …

Boolean dynamics of networks with scale-free topology

M Aldana - Physica D: Nonlinear Phenomena, 2003 - Elsevier
The dynamics of Boolean networks with scale-free topology are studied. The existence of a
phase transition from ordered to chaotic dynamics, governed by the value of the scale-free …

Complexity and information: Measuring emergence, self‐organization, and homeostasis at multiple scales

C Gershenson, N Fernández - Complexity, 2012 - Wiley Online Library
Abstract Concepts used in the scientific study of complex systems have become so
widespread that their use and abuse has led to ambiguity and confusion in their meaning. In …

Critical dynamics in genetic regulatory networks: examples from four kingdoms

E Balleza, ER Alvarez-Buylla, A Chaos, S Kauffman… - PLoS …, 2008 - journals.plos.org
The coordinated expression of the different genes in an organism is essential to sustain
functionality under the random external perturbations to which the organism might be …

Superpolynomial growth in the number of attractors in Kauffman networks

B Samuelsson, C Troein - Physical Review Letters, 2003 - APS
The Kauffman model describes a particularly simple class of random Boolean networks.
Despite the simplicity of the model, it exhibits complex behavior and has been suggested as …

[图书][B] Control of complex systems: Structural constraints and uncertainty

A Zecevic, DD Siljak - 2010 - books.google.com
" Control of Complex Systems: Structural Constraints and Uncertainty" focuses on control
design under information structure constraints, with a particular emphasis on large-scale …

Information measures of complexity, emergence, self-organization, homeostasis, and autopoiesis

N Fernández, C Maldonado, C Gershenson - Guided self-organization …, 2014 - Springer
In recent decades, the scientific study of complex systems (Bar-Yam 1997; Mitchell 2009)
has demanded a paradigm shift in our worldviews (Gershenson et al. 2007; Heylighen et al …