Chemical exchange in biomacromolecules: past, present, and future
AG Palmer III - Journal of magnetic resonance, 2014 - Elsevier
The perspective reviews quantitative investigations of chemical exchange phenomena in
proteins and other biological macromolecules using NMR spectroscopy, particularly …
proteins and other biological macromolecules using NMR spectroscopy, particularly …
Protein conformational populations and functionally relevant substates
Functioning proteins do not remain fixed in a unique structure, but instead they sample a
range of conformations facilitated by motions within the protein. Even in the native state, a …
range of conformations facilitated by motions within the protein. Even in the native state, a …
Kinetic resolution of the atomic 3D structures formed by ground and excited conformational states in an RNA dynamic ensemble
Knowing the 3D structures formed by the various conformations populating the RNA free-
energy landscape, their relative abundance, and kinetic interconversion rates is required to …
energy landscape, their relative abundance, and kinetic interconversion rates is required to …
Picosecond to millisecond structural dynamics in human ubiquitin
Human ubiquitin has been extensively characterized using a variety of experimental and
computational methods and has become an important model for studying protein dynamics …
computational methods and has become an important model for studying protein dynamics …
Combining experimental and simulation data of molecular processes via augmented Markov models
Accurate mechanistic description of structural changes in biomolecules is an increasingly
important topic in structural and chemical biology. Markov models have emerged as a …
important topic in structural and chemical biology. Markov models have emerged as a …
Relaxation dynamics of a protein solution investigated by dielectric spectroscopy
In the present work, we provide a dielectric study on two differently concentrated aqueous
lysozyme solutions in the frequency range from 1MHz to 40GHz and for temperatures from …
lysozyme solutions in the frequency range from 1MHz to 40GHz and for temperatures from …
Distribution of pico-and nanosecond motions in disordered proteins from nuclear spin relaxation
Intrinsically disordered proteins and intrinsically disordered regions (IDRs) are ubiquitous in
the eukaryotic proteome. The description and understanding of their conformational …
the eukaryotic proteome. The description and understanding of their conformational …
Nanosecond time scale motions in proteins revealed by high-resolution NMR relaxometry
C Charlier, SN Khan, T Marquardsen… - Journal of the …, 2013 - ACS Publications
Understanding the molecular determinants underlying protein function requires the
characterization of both structure and dynamics at atomic resolution. Nuclear relaxation …
characterization of both structure and dynamics at atomic resolution. Nuclear relaxation …
Allosteric switch regulates protein–protein binding through collective motion
Many biological processes depend on allosteric communication between different parts of a
protein, but the role of internal protein motion in propagating signals through the structure …
protein, but the role of internal protein motion in propagating signals through the structure …
Entropy transfer between residue pairs and allostery in proteins: quantifying allosteric communication in ubiquitin
It has recently been proposed by Gunasakaran et al. that allostery may be an intrinsic
property of all proteins. Here, we develop a computational method that can determine and …
property of all proteins. Here, we develop a computational method that can determine and …