Excision repair of topoisomerase DNA-protein crosslinks (TOP-DPC)

Y Sun, S Saha, W Wang, LK Saha, SYN Huang… - DNA repair, 2020 - Elsevier
Topoisomerases are essential enzymes solving DNA topological problems such as
supercoils, knots and catenanes that arise from replication, transcription, chromatin …

[HTML][HTML] The chromatin response to double-strand DNA breaks and their repair

R Aleksandrov, R Hristova, S Stoynov, A Gospodinov - Cells, 2020 - mdpi.com
Cellular DNA is constantly being damaged by numerous internal and external mutagenic
factors. Probably the most severe type of insults DNA could suffer are the double-strand …

Endogenous DNA 3′ blocks are vulnerabilities for BRCA1 and BRCA2 deficiency and are reversed by the APE2 nuclease

A Álvarez-Quilón, JL Wojtaszek, MC Mathieu, T Patel… - Molecular cell, 2020 - cell.com
The APEX2 gene encodes APE2, a nuclease related to APE1, the apurinic/apyrimidinic
endonuclease acting in base excision repair. Loss of APE2 is lethal in cells with mutated …

Synthesis and comprehensive spectroscopic (X-ray, NMR, FTIR, UV–Vis), quantum chemical and molecular docking investigation of 3-acetyl-4‑hydroxy‑2-oxo-2H …

ŽB Milanović, DS Dimić, EH Avdović… - Journal of Molecular …, 2021 - Elsevier
In the present study, the structural, spectroscopic (FT-IR, NMR, and UV–Vis) and electronic
properties of newly synthesized 3-acetyl-4‑hydroxy‑2-oxo-2H-chromen-7-yl acetate …

Transcription-coupled DNA double-strand break repair

S Guha, SR Bhaumik - DNA repair, 2022 - Elsevier
The genomic DNA is constantly under attack by cellular and/or environmental factors.
Fortunately, the cell is armed to safeguard its genome by various mechanisms such as …

Dual DNA topoisomerase 1 and tyrosyl‐DNA phosphodiesterase 1 inhibition for improved anticancer activity

A Zakharenko, N Dyrkheeva… - Medicinal Research …, 2019 - Wiley Online Library
Abstract Tyrosyl‐DNA phosphodiesterase 1 (Tdp1) is a DNA repair enzyme that catalyzes
the hydrolysis of the phosphodiester bond in the DNA‐topoisomerase 1 (Top1) covalent …

Targeted sulfur (VI) fluoride exchange-mediated covalent modification of a tyrosine residue in the catalytic pocket of tyrosyl-DNA phosphodiesterase 1

XZ Zhao, IA Barakat, GT Lountos, W Wang… - Communications …, 2024 - nature.com
Develo** effective inhibitors of the DNA repair enzyme tyrosyl-DNA phosphodiesterase 1
(TDP1) has been challenging because of the enzyme shallow catalytic pocket and non …

From the TOP: Formation, recognition and resolution of topoisomerase DNA protein crosslinks

JL Wojtaszek, RS Williams - DNA repair, 2024 - Elsevier
Since the report of “DNA untwisting” activity in 1972,∼ 50 years of research has revealed
seven topoisomerases in humans (TOP1, TOP1mt, TOP2α, TOP2β, TOP3α, TOP3β and …

N-terminal domain of tyrosyl-DNA phosphodiesterase I regulates topoisomerase I-induced toxicity in cells

EJ Brettrager, SM Cuya, ZE Tibbs, J Zhang… - Scientific Reports, 2023 - nature.com
Abstract Tyrosyl-DNA phosphodiesterase I (Tdp1) hydrolyzes phosphodiester-linked
adducts from both ends of DNA. This includes the topoisomerase I (TOP1)-DNA covalent …

Small molecule microarray identifies inhibitors of tyrosyl-DNA phosphodiesterase 1 that simultaneously access the catalytic pocket and two substrate binding sites

XZ Zhao, E Kiselev, GT Lountos, W Wang… - Chemical …, 2021 - pubs.rsc.org
Tyrosyl-DNA phosphodiesterase 1 (TDP1) is a member of the phospholipase D family of
enzymes, which catalyzes the removal of both 3′-and 5′-DNA phosphodiester adducts …