Restricting retrotransposons: a review

JL Goodier - Mobile DNA, 2016 - Springer
Retrotransposons have generated about 40% of the human genome. This review examines
the strategies the cell has evolved to coexist with these genomic “parasites”, focussing on …

Evolution and diversity of transposable elements in vertebrate genomes

CG Sotero-Caio, RN Platt, A Suh… - Genome biology and …, 2017 - academic.oup.com
Transposable elements (TEs) are selfish genetic elements that mobilize in genomes via
transposition or retrotransposition and often make up large fractions of vertebrate genomes …

From telomere to telomere: The transcriptional and epigenetic state of human repeat elements

SJ Hoyt, JM Storer, GA Hartley, PGS Grady… - Science, 2022 - science.org
Mobile elements and repetitive genomic regions are sources of lineage-specific genomic
innovation and uniquely fingerprint individual genomes. Comprehensive analyses of such …

Comparative analysis of transposable elements highlights mobilome diversity and evolution in vertebrates

D Chalopin, M Naville, F Plard… - Genome biology and …, 2015 - academic.oup.com
Transposable elements (TEs) are major components of vertebrate genomes, with major
roles in genome architecture and evolution. In order to characterize both common patterns …

The genome of the green anole lizard and a comparative analysis with birds and mammals

J Alföldi, F Di Palma, M Grabherr, C Williams, L Kong… - Nature, 2011 - nature.com
The evolution of the amniotic egg was one of the great evolutionary innovations in the
history of life, freeing vertebrates from an obligatory connection to water and thus permitting …

Active transposition in genomes

CRL Huang, KH Burns, JD Boeke - Annual review of genetics, 2012 - annualreviews.org
Transposons are DNA sequences capable of moving in genomes. Early evidence showed
their accumulation in many species and suggested their continued activity in at least isolated …

Genome evolution and biodiversity in teleost fish

JN Volff - Heredity, 2005 - nature.com
Teleost fish, which roughly make up half of the extant vertebrate species, exhibit an amazing
level of biodiversity affecting their morphology, ecology and behaviour as well as many other …

Promiscuous DNA: horizontal transfer of transposable elements and why it matters for eukaryotic evolution

S Schaack, C Gilbert, C Feschotte - Trends in ecology & evolution, 2010 - cell.com
Horizontal transfer is the passage of genetic material between genomes by means other
than parent-to-offspring inheritance. Although the transfer of genes is thought to be crucial in …

Zebrafish transposable elements show extensive diversification in age, genomic distribution, and developmental expression

NC Chang, Q Rovira, J Wells, C Feschotte… - Genome …, 2022 - genome.cshlp.org
There is considerable interest in understanding the effect of transposable elements (TEs) on
embryonic development. Studies in humans and mice are limited by the difficulty of working …

Synergy between sequence and size in large-scale genomics

TR Gregory - Nature Reviews Genetics, 2005 - nature.com
Until recently the study of individual DNA sequences and of total DNA content (the C-value)
sat at opposite ends of the spectrum in genome biology. For gene sequencers, the vast …