Diversity and evolution of the animal virome

E Harvey, EC Holmes - Nature Reviews Microbiology, 2022 - nature.com
The COVID-19 pandemic has given the study of virus evolution and ecology new relevance.
Although viruses were first identified more than a century ago, we likely know less about …

How accurately can we assess zoonotic risk?

M Wille, JL Geoghegan, EC Holmes - PLoS biology, 2021 - journals.plos.org
Identifying the animal reservoirs from which zoonotic viruses will likely emerge is central to
understanding the determinants of disease emergence. Accordingly, there has been an …

Host adaptive radiation is associated with rapid virus diversification and cross-species transmission in African cichlid fishes

VA Costa, F Ronco, JCO Mifsud, E Harvey… - Current Biology, 2024 - cell.com
Adaptive radiations are generated through a complex interplay of biotic and abiotic factors.
Although adaptive radiations have been widely studied in the context of animal and plant …

Transcriptome mining extends the host range of the Flaviviridae to non-bilaterians

JCO Mifsud, VA Costa, ME Petrone… - Virus …, 2023 - academic.oup.com
The flavivirids (family Flaviviridae) are a group of positive-sense RNA viruses that include
well-documented agents of human disease. Despite their importance and ubiquity, the …

A Brief History of Bunyaviral Family Hantaviridae

JH Kuhn, CS Schmaljohn - Diseases, 2023 - mdpi.com
The discovery of Hantaan virus as an etiologic agent of hemorrhagic fever with renal
syndrome in South Korea in 1978 led to identification of related pathogenic and …

Novel virus identification through metagenomics: a systematic review

C Bassi, P Guerriero, M Pierantoni, E Callegari… - Life, 2022 - mdpi.com
Metagenomic Next Generation Sequencing (mNGS) allows the evaluation of complex
microbial communities, avoiding isolation and cultivation of each microbial species, and …

Intra-and cross-species transmission of astroviruses

SN Roach, RA Langlois - Viruses, 2021 - mdpi.com
Astroviruses are non-enveloped, single-stranded RNA viruses that infect mammalian and
avian species. In humans, astrovirus infections are one of the most common causes of …

Pending Reorganization of Hantaviridae to Include Only Completely Sequenced Viruses: A Call to Action

JH Kuhn, SB Bradfute, CH Calisher, B Klempa… - Viruses, 2023 - mdpi.com
The official classification of newly discovered or long-known unassigned viruses by the
International Committee on Taxonomy of Viruses (ICTV) requires the deposition of coding …

Diet and host genetics drive the bacterial and fungal intestinal metatranscriptome of gilthead sea bream

F Naya-Català, MC Piazzon… - Frontiers in …, 2022 - frontiersin.org
The gut microbiota is now recognised as a key target for improving aquaculture profit and
sustainability, but we still lack insights into the activity of microbes in fish mucosal surfaces …

[HTML][HTML] Novel filoviruses, hantavirus, and rhabdovirus in freshwater fish, Switzerland, 2017

MM Hierweger, MC Koch, M Rupp, P Maes… - Emerging infectious …, 2021 - ncbi.nlm.nih.gov
European perch (Perca fluviatilis) are increasingly farmed as a human food source. Viral
infections of European perch remain largely unexplored, thereby putting farm populations at …