Scanning probe microscopy

K Bian, C Gerber, AJ Heinrich, DJ Müller… - Nature Reviews …, 2021 - nature.com
Scanning probe microscopy (SPM), a key invention in nanoscience, has by now been
extended to a wide spectrum of basic and applied fields. Its application to basic science led …

[HTML][HTML] TALE and TALEN genome editing technologies

S Becker, J Boch - Gene and Genome Editing, 2021 - Elsevier
TALEN were the first easy-to-use genome editing technology and sparked the genome
editing revolution. Their application in multiple species brought targeted mutagenesis to the …

[HTML][HTML] Mitigation of chromosome loss in clinical CRISPR-Cas9-engineered T cells

CA Tsuchida, N Brandes, R Bueno, M Trinidad… - Cell, 2023 - cell.com
CRISPR-Cas9 genome editing has enabled advanced T cell therapies, but occasional loss
of the targeted chromosome remains a safety concern. To investigate whether Cas9-induced …

[HTML][HTML] Localization atomic force microscopy

GR Heath, E Kots, JL Robertson, S Lansky… - Nature, 2021 - nature.com
Understanding structural dynamics of biomolecules at the single-molecule level is vital to
advancing our knowledge of molecular mechanisms. Currently, there are few techniques …

Directed evolution of CRISPR-Cas9 to increase its specificity

JK Lee, E Jeong, J Lee, M Jung, E Shin, Y Kim… - Nature …, 2018 - nature.com
The use of CRISPR-Cas9 as a therapeutic reagent is hampered by its off-target effects.
Although rationally designed S. pyogenes Cas9 (SpCas9) variants that display higher …

Unbiased detection of CRISPR off-targets in vivo using DISCOVER-Seq

B Wienert, SK Wyman, CD Richardson, CD Yeh… - Science, 2019 - science.org
CRISPR-Cas genome editing induces targeted DNA damage but can also affect off-target
sites. Current off-target discovery methods work using purified DNA or specific cellular …

Structural basis for channel conduction in the pump-like channelrhodopsin ChRmine

KE Kishi, YS Kim, M Fukuda, M Inoue, T Kusakizako… - Cell, 2022 - cell.com
ChRmine, a recently discovered pump-like cation-conducting channelrhodopsin, exhibits
puzzling properties (large photocurrents, red-shifted spectrum, and extreme light sensitivity) …

Kinetics and fidelity of the repair of Cas9-induced double-strand DNA breaks

EK Brinkman, T Chen, M de Haas, HA Holland… - Molecular cell, 2018 - cell.com
The RNA-guided DNA endonuclease Cas9 is a powerful tool for genome editing. Little is
known about the kinetics and fidelity of the double-strand break (DSB) repair process that …

Construct design for CRISPR/Cas-based genome editing in plants

MM Hassan, Y Zhang, G Yuan, K De, JG Chen… - Trends in Plant …, 2021 - cell.com
CRISPR construct design is a key step in the practice of genome editing, which includes
identification of appropriate Cas proteins, design and selection of guide RNAs (gRNAs), and …

Cas9 versus Cas12a/Cpf1: Structure–function comparisons and implications for genome editing

DC Swarts, M **ek - Wiley Interdisciplinary Reviews: RNA, 2018 - Wiley Online Library
Cas9 and Cas12a are multidomain CRISPR‐associated nucleases that can be programmed
with a guide RNA to bind and cleave complementary DNA targets. The guide RNA …