New trends in peptide-based anti-biofilm strategies: a review of recent achievements and bioinformatic approaches

P Jorge, A Lourenco, MO Pereira - Biofouling, 2012 - Taylor & Francis
Antimicrobial peptides (AMPs) have a broad spectrum of activity and unspecific mechanisms
of action. Therefore, they are seen as valid alternatives to overcome clinically relevant …

[BOOK][B] Association rule mining: models and algorithms

C Zhang, S Zhang - 2002 - Springer
During decision making, we are often confronted by a huge amount of factors. These factors
may be either an advantage or a disadvantage to a decision objective. For the purpose of …

Tutorial on practical tips of the most influential data preprocessing algorithms in data mining

S García, J Luengo, F Herrera - Knowledge-Based Systems, 2016 - Elsevier
Data preprocessing is a major and essential stage whose main goal is to obtain final data
sets that can be considered correct and useful for further data mining algorithms. This paper …

Analysis and prediction of protein stability based on interaction network, gene ontology, and KEGG pathway enrichment scores

F Huang, M Fu, JR Li, L Chen, KY Feng… - … et Biophysica Acta (BBA …, 2023 - Elsevier
Metabolic stability of proteins plays a vital role in various dedicated cellular processes.
Traditional methods of measuring the metabolic stability are time-consuming and expensive …

Identification of Smoking‐Associated Transcriptome Aberration in Blood with Machine Learning Methods

FM Huang, QL Ma, JX Ren, JR Li… - BioMed research …, 2023 - Wiley Online Library
Long‐term cigarette smoking causes various human diseases, including respiratory
disease, cancer, and gastrointestinal (GI) disorders. Alterations in gene expression and …

An explainable AI-driven biomarker discovery framework for Non-Small Cell Lung Cancer classification

K Dwivedi, A Rajpal, S Rajpal, M Agarwal… - Computers in Biology …, 2023 - Elsevier
Abstract Non-Small Cell Lung Cancer (NSCLC) exhibits intrinsic heterogeneity at the
molecular level that aids in distinguishing between its two prominent subtypes—Lung …

Predicting heart cell types by using transcriptome profiles and a machine learning method

S Ding, D Wang, X Zhou, L Chen, K Feng, X Xu… - Life, 2022 - mdpi.com
The heart is an essential organ in the human body. It contains various types of cells, such as
cardiomyocytes, mesothelial cells, endothelial cells, and fibroblasts. The interactions …

Predicting RNA 5‐Methylcytosine Sites by Using Essential Sequence Features and Distributions

L Chen, ZD Li, SQ Zhang, YH Zhang… - BioMed Research …, 2022 - Wiley Online Library
Methylation is one of the most common and considerable modifications in biological systems
mediated by multiple enzymes. Recent studies have shown that methylation has been …

Semisupervised feature selection based on relevance and redundancy criteria

J Xu, B Tang, H He, H Man - IEEE transactions on neural …, 2016 - ieeexplore.ieee.org
Feature selection aims to gain relevant features for improved classification performance and
remove redundant features for reduced computational cost. How to balance these two …

Identifying transcriptomic signatures and rules for SARS-CoV-2 infection

YH Zhang, H Li, T Zeng, L Chen, Z Li… - Frontiers in Cell and …, 2021 - frontiersin.org
The world-wide Coronavirus Disease 2019 (COVID-19) pandemic was triggered by the
widespread of a new strain of coronavirus named as severe acute respiratory syndrome …