The genetics of quantitative traits: challenges and prospects

TFC Mackay, EA Stone, JF Ayroles - Nature Reviews Genetics, 2009 - nature.com
A major challenge in current biology is to understand the genetic basis of variation for
quantitative traits. We review the principles of quantitative trait locus map** and …

[PDF][PDF] Natural genetic variation as a tool for discovery in Caenorhabditis nematodes

EC Andersen, MV Rockman - Genetics, 2022 - academic.oup.com
Over the last 20 years, studies of Caenorhabditis elegans natural diversity have
demonstrated the power of quantitative genetic approaches to reveal the evolutionary …

Transcriptome-wide map** reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA

S Schwartz, DA Bernstein, MR Mumbach, M Jovanovic… - Cell, 2014 - cell.com
Pseudouridine is the most abundant RNA modification, yet except for a few well-studied
cases, little is known about the modified positions and their function (s). Here, we develop Ψ …

[HTML][HTML] Efficient multiplexed integration of synergistic alleles and metabolic pathways in yeasts via CRISPR-Cas

AA Horwitz, JM Walter, MG Schubert, SH Kung… - Cell systems, 2015 - cell.com
CRISPR-Cas genome engineering in yeast has relied on preparation of complex expression
plasmids for multiplexed gene knockouts and point mutations. Here we show that co …

A high-definition view of functional genetic variation from natural yeast genomes

A Bergström, JT Simpson, F Salinas… - Molecular biology …, 2014 - academic.oup.com
The question of how genetic variation in a population influences phenotypic variation and
evolution is of major importance in modern biology. Yet much is still unknown about the …

Natural variations of SLG1 confer high-temperature tolerance in indica rice

Y Xu, L Zhang, S Ou, R Wang, Y Wang, C Chu… - Nature …, 2020 - nature.com
With global warming and climate change, breeding crop plants tolerant to high-temperature
stress is of immense significance. tRNA 2-thiolation is a highly conserved form of tRNA …

Revealing the genetic structure of a trait by sequencing a population under selection

L Parts, FA Cubillos, J Warringer, K Jain… - Genome …, 2011 - genome.cshlp.org
One approach to understanding the genetic basis of traits is to study their pattern of
inheritance among offspring of phenotypically different parents. Previously, such analysis …

Genome structure of a Saccharomyces cerevisiae strain widely used in bioethanol production

JL Argueso, MF Carazzolle, PA Mieczkowski… - Genome …, 2009 - genome.cshlp.org
Bioethanol is a biofuel produced mainly from the fermentation of carbohydrates derived from
agricultural feedstocks by the yeast Saccharomyces cerevisiae. One of the most widely …

Idiosyncratic epistasis leads to global fitness–correlated trends

CW Bakerlee, AN Nguyen Ba, Y Shulgina… - Science, 2022 - science.org
Epistasis can markedly affect evolutionary trajectories. In recent decades, protein-level
fitness landscapes have revealed extensive idiosyncratic epistasis among specific …

Experimental evolution of yeast for high-temperature tolerance

CJ Huang, MY Lu, YW Chang… - Molecular biology and …, 2018 - academic.oup.com
Thermotolerance is a polygenic trait that contributes to cell survival and growth under
unusually high temperatures. Although some genes associated with high-temperature …