Autophagy genes in biology and disease

H Yamamoto, S Zhang, N Mizushima - Nature Reviews Genetics, 2023 - nature.com
Macroautophagy and microautophagy are highly conserved eukaryotic cellular processes
that degrade cytoplasmic material in lysosomes. Both pathways involve characteristic …

Autophagy and autophagy-related proteins in cancer

X Li, S He, B Ma - Molecular cancer, 2020 - Springer
Autophagy, as a type II programmed cell death, plays crucial roles with autophagy-related
(ATG) proteins in cancer. Up to now, the dual role of autophagy both in cancer progression …

Liquid–liquid phase separation drives cellular function and dysfunction in cancer

S Mehta, J Zhang - Nature Reviews Cancer, 2022 - nature.com
Cancer is a disease of uncontrollably reproducing cells. It is governed by biochemical
pathways that have escaped the regulatory bounds of normal homeostatic balance. This …

Mechanisms governing autophagosome biogenesis

H Nakatogawa - Nature reviews Molecular cell biology, 2020 - nature.com
Autophagosomes are double-membrane vesicles newly formed during autophagy to engulf
a wide range of intracellular material and transport this autophagic cargo to lysosomes (or …

Biomolecular condensates and cancer

A Boija, IA Klein, RA Young - Cancer cell, 2021 - cell.com
Malignant transformation is characterized by dysregulation of diverse cellular processes that
have been the subject of detailed genetic, biochemical, and structural studies, but only …

Mechanisms of autophagy initiation

JH Hurley, LN Young - Annual review of biochemistry, 2017 - annualreviews.org
Autophagy is the process of cellular self-eating by a double-membrane organelle, the
autophagosome. A range of signaling processes converge on two protein complexes to …

Phase separation organizes the site of autophagosome formation

Y Fujioka, JM Alam, D Noshiro, K Mouri, T Ando… - Nature, 2020 - nature.com
Many biomolecules undergo liquid–liquid phase separation to form liquid-like condensates
that mediate diverse cellular functions,. Autophagy is able to degrade such condensates …

Phase separation in membrane biology: the interplay between membrane-bound organelles and membraneless condensates

YG Zhao, H Zhang - Developmental Cell, 2020 - cell.com
In eukaryotic cells, various membrane-bound organelles compartmentalize diverse cellular
activities in a spatially and temporally controlled manner. Numerous membraneless …

Intrinsically disordered protein TEX264 mediates ER-phagy

H Chino, T Hatta, T Natsume, N Mizushima - Molecular cell, 2019 - cell.com
Certain proteins and organelles can be selectively degraded by autophagy. Typical
substrates and receptors of selective autophagy have LC3-interacting regions (LIRs) that …

Emerging roles of ATG proteins and membrane lipids in autophagosome formation

T Nishimura, SA Tooze - Cell discovery, 2020 - nature.com
Autophagosome biogenesis is a dynamic membrane event, which is executed by the
sequential function of autophagy-related (ATG) proteins. Upon autophagy induction, a cup …