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Functions and consequences of AID/APOBEC-mediated DNA and RNA deamination
The AID/APOBEC polynucleotide cytidine deaminases have historically been classified as
either DNA mutators or RNA editors based on their first identified nucleic acid substrate …
either DNA mutators or RNA editors based on their first identified nucleic acid substrate …
V (D) J recombination, somatic hypermutation and class switch recombination of immunoglobulins: mechanism and regulation
X Chi, Y Li, X Qiu - Immunology, 2020 - Wiley Online Library
Immunoglobulins emerging from B lymphocytes and capable of recognizing almost all kinds
of antigens owing to the extreme diversity of their antigen‐binding portions, known as …
of antigens owing to the extreme diversity of their antigen‐binding portions, known as …
Evolution of an adenine base editor into a small, efficient cytosine base editor with low off-target activity
Cytosine base editors (CBEs) are larger and can suffer from higher off-target activity or lower
on-target editing efficiency than current adenine base editors (ABEs). To develop a CBE that …
on-target editing efficiency than current adenine base editors (ABEs). To develop a CBE that …
[HTML][HTML] Detection of alternative DNA structures and its implications for human disease
Around 3% of the genome consists of simple DNA repeats that are prone to forming
alternative (non-B) DNA structures, such as hairpins, cruciforms, triplexes (H-DNA), four …
alternative (non-B) DNA structures, such as hairpins, cruciforms, triplexes (H-DNA), four …
AID in antibody diversification: there and back again
Activation-Induced cytidine Deaminase (AID) initiates affinity maturation and isotype
switching by deaminating deoxycytidines within immunoglobulin genes, leading to somatic …
switching by deaminating deoxycytidines within immunoglobulin genes, leading to somatic …
[HTML][HTML] G-quadruplex resolution: From molecular mechanisms to physiological relevance
K Sato, P Knipscheer - DNA repair, 2023 - Elsevier
Guanine-rich DNA sequences can fold into stable four-stranded structures called G-
quadruplexes or G4s. Research in the past decade demonstrated that G4 structures are …
quadruplexes or G4s. Research in the past decade demonstrated that G4 structures are …
APOBEC-induced mutagenesis in cancer
TM Mertz, CD Collins, M Dennis… - Annual Review of …, 2022 - annualreviews.org
The initiation, progression, and relapse of cancers often result from mutations occurring
within somatic cells. Consequently, processes that elevate mutation rates accelerate …
within somatic cells. Consequently, processes that elevate mutation rates accelerate …
G-quadruplex–R-loop interactions and the mechanism of anticancer G-quadruplex binders
Genomic DNA and cellular RNAs can form a variety of non-B secondary structures, including
G-quadruplex (G4) and R-loops. G4s are constituted by stacked guanine tetrads held …
G-quadruplex (G4) and R-loops. G4s are constituted by stacked guanine tetrads held …
RNA helicase DDX1 converts RNA G-quadruplex structures into R-loops to promote IgH class switch recombination
Class switch recombination (CSR) at the immunoglobulin heavy-chain (IgH) locus is
associated with the formation of R-loop structures over switch (S) regions. While these often …
associated with the formation of R-loop structures over switch (S) regions. While these often …
TET deficiency perturbs mature B cell homeostasis and promotes oncogenesis associated with accumulation of G-quadruplex and R-loop structures
Enzymes of the TET family are methylcytosine dioxygenases that undergo frequent
mutational or functional inactivation in human cancers. Recurrent loss-of-function mutations …
mutational or functional inactivation in human cancers. Recurrent loss-of-function mutations …