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Within-host evolution of bacterial pathogens
Whole-genome sequencing has opened the way for investigating the dynamics and
genomic evolution of bacterial pathogens during the colonization and infection of humans …
genomic evolution of bacterial pathogens during the colonization and infection of humans …
Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues
Whole genome sequencing (WGS) of Mycobacterium tuberculosis has rapidly progressed
from a research tool to a clinical application for the diagnosis and management of …
from a research tool to a clinical application for the diagnosis and management of …
Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages
Generalist and specialist species differ in the breadth of their ecological niches. Little is
known about the niche width of obligate human pathogens. Here we analyzed a global …
known about the niche width of obligate human pathogens. Here we analyzed a global …
Four-month moxifloxacin-based regimens for drug-sensitive tuberculosis
Background Early-phase and preclinical studies suggest that moxifloxacin-containing
regimens could allow for effective 4-month treatment of uncomplicated, smear-positive …
regimens could allow for effective 4-month treatment of uncomplicated, smear-positive …
Integrating informatics tools and portable sequencing technology for rapid detection of resistance to anti-tuberculous drugs
Background Mycobacterium tuberculosis resistance to anti-tuberculosis drugs is a major
threat to global public health. Whole genome sequencing (WGS) is rapidly gaining traction …
threat to global public health. Whole genome sequencing (WGS) is rapidly gaining traction …
Tuberculosis treatment failure associated with evolution of antibiotic resilience
The widespread use of antibiotics has placed bacterial pathogens under intense pressure to
evolve new survival mechanisms. Genomic analysis of 51,229 Mycobacterium tuberculosis …
evolve new survival mechanisms. Genomic analysis of 51,229 Mycobacterium tuberculosis …
Transmission of multidrug-resistant Mycobacterium tuberculosis in Shanghai, China: a retrospective observational study using whole-genome sequencing and …
Background Multidrug-resistance is a substantial threat to global elimination of tuberculosis.
Understanding transmission patterns is crucial for control of the disease. We used a …
Understanding transmission patterns is crucial for control of the disease. We used a …
Co‐evolution of Mycobacterium tuberculosis and Homo sapiens
The causative agent of human tuberculosis (TB), M ycobacterium tuberculosis, is an obligate
pathogen that evolved to exclusively persist in human populations. For M. tuberculosis to …
pathogen that evolved to exclusively persist in human populations. For M. tuberculosis to …
Whole-genome sequencing to control antimicrobial resistance
Following recent improvements in sequencing technologies, whole-genome sequencing
(WGS) is positioned to become an essential tool in the control of antibiotic resistance, a …
(WGS) is positioned to become an essential tool in the control of antibiotic resistance, a …
Genomic insights into tuberculosis
JE Galagan - Nature Reviews Genetics, 2014 - nature.com
Prevalent since pre-history, human tuberculosis—caused by the pathogen Mycobacterium
tuberculosis—remains a major source of death worldwide. Moreover, increasing drug …
tuberculosis—remains a major source of death worldwide. Moreover, increasing drug …