Advances and trends in omics technology development

X Dai, L Shen - Frontiers in Medicine, 2022 - frontiersin.org
The human history has witnessed the rapid development of technologies such as high-
throughput sequencing and mass spectrometry that led to the concept of “omics” and …

Microbial metabolites in the marine carbon cycle

MA Moran, EB Kujawinski, WF Schroer, SA Amin… - Nature …, 2022 - nature.com
One-quarter of photosynthesis-derived carbon on Earth rapidly cycles through a set of short-
lived seawater metabolites that are generated from the activities of marine phytoplankton …

An introduction to mass spectrometry-based proteomics

SR Shuken - Journal of proteome research, 2023 - ACS Publications
Mass spectrometry is unmatched in its versatility for studying practically any aspect of the
proteome. Because the foundations of mass spectrometry-based proteomics are complex …

[HTML][HTML] Towards the sustainable discovery and development of new antibiotics

M Miethke, M Pieroni, T Weber, M Brönstrup… - Nature Reviews …, 2021 - nature.com
An ever-increasing demand for novel antimicrobials to treat life-threatening infections
caused by the global spread of multidrug-resistant bacterial pathogens stands in stark …

Identification of bioactive metabolites using activity metabolomics

MM Rinschen, J Ivanisevic, M Giera… - Nature reviews Molecular …, 2019 - nature.com
The metabolome, the collection of small-molecule chemical entities involved in metabolism,
has traditionally been studied with the aim of identifying biomarkers in the diagnosis and …

Large-scale chemoproteomics expedites ligand discovery and predicts ligand behavior in cells

F Offensperger, G Tin, M Duran-Frigola, E Hahn… - Science, 2024 - science.org
Chemical modulation of proteins enables a mechanistic understanding of biology and
represents the foundation of most therapeutics. However, despite decades of research, 80 …

Crosstalk between mechanotransduction and metabolism

P Romani, L Valcarcel-Jimenez, C Frezza… - … Reviews Molecular Cell …, 2021 - nature.com
Mechanical forces shape cells and tissues during development and adult homeostasis. In
addition, they also signal to cells via mechanotransduction pathways to control cell …

The EcoCyc Database (2023)

PD Karp, S Paley, R Caspi, A Kothari… - EcoSal …, 2023 - journals.asm.org
EcoCyc is a bioinformatics database available online at EcoCyc. org that describes the
genome and the biochemical machinery of Escherichia coli K-12 MG1655. The long-term …

Targeting phenylpyruvate restrains excessive NLRP3 inflammasome activation and pathological inflammation in diabetic wound healing

D Lv, X Cao, L Zhong, Y Dong, Z Xu, Y Rong, H Xu… - Cell Reports …, 2023 - cell.com
Moderate inflammation is essential for standard wound healing. In pathological conditions,
such as diabetes, protracted and refractory wounds are associated with excessive …

Proteomic and interactomic insights into the molecular basis of cell functional diversity

I Bludau, R Aebersold - Nature Reviews Molecular Cell Biology, 2020 - nature.com
The ability of living systems to adapt to changing conditions originates from their capacity to
change their molecular constitution. This is achieved by multiple mechanisms that modulate …