Determination of stable housekee** genes, differentially regulated target genes and sample integrity: BestKeeper–Excel-based tool using pair-wise correlations
MW Pfaffl, A Tichopad, C Prgomet, TP Neuvians - Biotechnology letters, 2004 - Springer
The stability of standard gene expression is an elementary prerequisite for internal
standardisation of target gene expression data and many so called housekee** genes …
standardisation of target gene expression data and many so called housekee** genes …
[BOOK][B] Data clustering: theory, algorithms, and applications
The monograph Data Clustering: Theory, Algorithms, and Applications was published in
2007. Starting with the common ground and knowledge for data clustering, the monograph …
2007. Starting with the common ground and knowledge for data clustering, the monograph …
Statistical issues with microarrays: processing and analysis
R Nadon, J Shoemaker - TRENDS in Genetics, 2002 - cell.com
The study of gene expression with printed arrays and prefabricated chips is evolving from a
qualitative to a quantitative science. Statistical procedures for determining quality control …
qualitative to a quantitative science. Statistical procedures for determining quality control …
Cluster analysis for gene expression data: a survey
DNA microarray technology has now made it possible to simultaneously monitor the
expression levels of thousands of genes during important biological processes and across …
expression levels of thousands of genes during important biological processes and across …
Analysis of microarray data using Z score transformation
High-throughput cDNA microarray technology allows for the simultaneous analysis of gene
expression levels for thousands of genes and as such, rapid, relatively simple methods are …
expression levels for thousands of genes and as such, rapid, relatively simple methods are …
Monitoring expression profiles of rice genes under cold, drought, and high-salinity stresses and abscisic acid application using cDNA microarray and RNA gel-blot …
Abstract To identify cold-, drought-, high-salinity-, and/or abscisic acid (ABA)-inducible
genes in rice (Oryza sativa), we prepared a rice cDNA microarray including about 1,700 …
genes in rice (Oryza sativa), we prepared a rice cDNA microarray including about 1,700 …
arrayQualityMetrics—a bioconductor package for quality assessment of microarray data
The assessment of data quality is a major concern in microarray analysis.
arrayQualityMetrics is a Bioconductor package that provides a report with diagnostic plots for …
arrayQualityMetrics is a Bioconductor package that provides a report with diagnostic plots for …
New developments in microarray technology
DH Blohm, A Guiseppi-Elie - Current Opinion in Biotechnology, 2001 - Elsevier
Microarrays have emerged as indispensable research tools for gene expression profiling
and mutation analysis. New classification of cancer subtypes, dissecting the yeast …
and mutation analysis. New classification of cancer subtypes, dissecting the yeast …
[BOOK][B] Kernel methods in computational biology
A detailed overview of current research in kernel methods and their application to
computational biology. Modern machine learning techniques are proving to be extremely …
computational biology. Modern machine learning techniques are proving to be extremely …
Monitoring large-scale changes in transcript abundance in drought-and salt-stressed barley
ZN Ozturk, V Talamé, M Deyholos… - Plant molecular …, 2002 - Springer
Responses to drought and salinity in barley (Hordeum vulgare L. cv. Tokak) were monitored
by microarray hybridization of 1463 DNA elements derived from cDNA libraries of 6 and 10 h …
by microarray hybridization of 1463 DNA elements derived from cDNA libraries of 6 and 10 h …