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Molecular rotors: Fluorescent sensors for microviscosity and conformation of biomolecules
The viscosity and crowding of biological environment are considered vital for the correct
cellular function, and alterations in these parameters are known to underly a number of …
cellular function, and alterations in these parameters are known to underly a number of …
[HTML][HTML] Noncanonical DNA structures are drivers of genome evolution
In addition to the canonical right-handed double helix, other DNA structures, termed 'non-B
DNA', can form in the genomes across the tree of life. Non-B DNA regulates multiple cellular …
DNA', can form in the genomes across the tree of life. Non-B DNA regulates multiple cellular …
Genome-wide map** of i-motifs reveals their association with transcription regulation in live human cells
Abstract i-Motifs (iMs) are four-stranded DNA structures that form at cytosine (C)-rich
sequences in acidic conditions in vitro. Their formation in cells is still under debate. We …
sequences in acidic conditions in vitro. Their formation in cells is still under debate. We …
G-quadruplexes associated with R-loops promote CTCF binding
CTCF is a critical regulator of genome architecture and gene expression that binds
thousands of sites on chromatin. CTCF genomic localization is controlled by the recognition …
thousands of sites on chromatin. CTCF genomic localization is controlled by the recognition …
Targeting specific DNA G-quadruplexes with CRISPR-guided G-quadruplex-binding proteins and ligands
G Qin, Z Liu, J Yang, X Liao, C Zhao, J Ren, X Qu - Nature Cell Biology, 2024 - nature.com
Despite the demonstrated importance of DNA G-quadruplexes (G4s) in health and disease,
technologies to readily manipulate specific G4 folding for functional analysis and therapeutic …
technologies to readily manipulate specific G4 folding for functional analysis and therapeutic …
Genome-wide map** of G-quadruplex structures with CUT&Tag
J Lyu, R Shao, PY Kwong Yung… - Nucleic acids …, 2022 - academic.oup.com
Single-stranded genomic DNA can fold into G-quadruplex (G4) structures or form DNA: RNA
hybrids (R loops). Recent evidence suggests that such non-canonical DNA structures affect …
hybrids (R loops). Recent evidence suggests that such non-canonical DNA structures affect …
SMARCAL1 is a dual regulator of innate immune signaling and PD-L1 expression that promotes tumor immune evasion
Genomic instability can trigger cancer-intrinsic innate immune responses that promote tumor
rejection. However, cancer cells often evade these responses by overexpressing immune …
rejection. However, cancer cells often evade these responses by overexpressing immune …
G-quadruplex DNA: a longer story
Conspectus G-quadruplexes (G4s) are distinctive four-stranded DNA or RNA structures
found within cells that are thought to play functional roles in gene regulation and …
found within cells that are thought to play functional roles in gene regulation and …
Structural basis of pyridostatin and its derivatives specifically binding to G-quadruplexes
LY Liu, TZ Ma, YL Zeng, W Liu… - Journal of the American …, 2022 - ACS Publications
The nucleic acid G-quadruplex (G4) has emerged as a promising therapeutic target for a
variety of diseases such as cancer and neurodegenerative disease. Among small-molecule …
variety of diseases such as cancer and neurodegenerative disease. Among small-molecule …
Genome-wide map** of G-quadruplex DNA: a step-by-step guide to select the most effective method.
The development of methods that enabled genome-wide map** of DNA G-quadruplex
structures in chromatin has played a critical role in providing evidence to support the …
structures in chromatin has played a critical role in providing evidence to support the …