Weakly supervised histopathology image segmentation with self-attention
Accurate segmentation in histopathology images at pixel-level plays a critical role in the
digital pathology workflow. The development of weakly supervised methods for …
digital pathology workflow. The development of weakly supervised methods for …
On supervised class-imbalanced learning: An updated perspective and some key challenges
The problem of class imbalance has always been considered as a significant challenge to
traditional machine learning and the emerging deep learning research communities. A …
traditional machine learning and the emerging deep learning research communities. A …
Transformer based multiple instance learning for weakly supervised histopathology image segmentation
Hispathological image segmentation algorithms play a critical role in computer aided
diagnosis technology. The development of weakly supervised segmentation algorithm …
diagnosis technology. The development of weakly supervised segmentation algorithm …
A CNN-based framework for estimation of root length, diameter, and color from in situ minirhizotron images
This work presents a framework based on convolutional neural networks (CNNs) to estimate
root traits (length, diameter, and color) from minirhizotron (MR) imagery. The proposed …
root traits (length, diameter, and color) from minirhizotron (MR) imagery. The proposed …
Supervised and weakly supervised deep learning for segmentation and counting of cotton bolls using proximal imagery
The total boll count from a plant is one of the most important phenotypic traits for cotton
breeding and is also an important factor for growers to estimate the final yield. With the …
breeding and is also an important factor for growers to estimate the final yield. With the …
PRMI: A dataset of minirhizotron images for diverse plant root study
Understanding a plant's root system architecture (RSA) is crucial for a variety of plant
science problem domains including sustainability and climate adaptation. Minirhizotron …
science problem domains including sustainability and climate adaptation. Minirhizotron …
Tracking growth and decay of plant roots in minirhizotron images
A Gillert, B Peters, UF Von Lukas… - Proceedings of the …, 2023 - openaccess.thecvf.com
Plant roots are difficult to monitor and study since they are hidden belowground.
Minirhizotrons offer an in-situ monitoring solution but their widespread adoption is still …
Minirhizotrons offer an in-situ monitoring solution but their widespread adoption is still …
Perennial grass root system specializes for multiple resource acquisitions with differential elongation and branching patterns
Roots optimize the acquisition of limited soil resources, but relationships between root forms
and functions have often been assumed rather than demonstrated. Furthermore, how root …
and functions have often been assumed rather than demonstrated. Furthermore, how root …
Identification and measurement of individual roots in minirhizotron images of dense root systems
A Gillert, B Peters, UF von Lukas… - Proceedings of the …, 2021 - openaccess.thecvf.com
Semantic segmentation networks are prone to oversegmentation in areas where objects are
tightly clustered. In minirhizotron images with densely packed plant root systems this can …
tightly clustered. In minirhizotron images with densely packed plant root systems this can …
Spatial and texture analysis of root system distribution with earth mover's distance (STARSEED)
Purpose Root system architectures are complex and challenging to characterize effectively
for agronomic and ecological discovery. Methods We propose a new method, Spatial and …
for agronomic and ecological discovery. Methods We propose a new method, Spatial and …