Four priority areas to advance invasion science in the face of rapid environmental change

A Ricciardi, JC Iacarella, DC Aldridge… - Environmental …, 2021 - cdnsciencepub.com
Unprecedented rates of introduction and spread of non-native species pose burgeoning
challenges to biodiversity, natural resource management, regional economies, and human …

Illuminating entomological dark matter with DNA barcodes in an era of insect decline, deep learning, and genomics

R Meier, MKN Lawniczak… - Annual Review of …, 2025 - annualreviews.org
Most insects encountered in the field are initially entomological dark matter in that they
cannot be identified to species while alive. This explains the enduring quest for efficient …

Convergence of dominance and neglect in flying insect diversity

A Srivathsan, Y Ang, JM Heraty, WS Hwang… - Nature ecology & …, 2023 - nature.com
Most of arthropod biodiversity is unknown to science. Consequently, it has been unclear
whether insect communities around the world are dominated by the same or different taxa …

ONTbarcoder and MinION barcodes aid biodiversity discovery and identification by everyone, for everyone

A Srivathsan, L Lee, K Katoh, E Hartop, SN Kutty… - BMC biology, 2021 - Springer
Background DNA barcodes are a useful tool for discovering, understanding, and monitoring
biodiversity which are critical tasks at a time of rapid biodiversity loss. However, widespread …

A re‐analysis of the data in Sharkey et al.'s (2021) minimalist revision reveals that BINs do not deserve names, but BOLD Systems needs a stronger commitment to …

R Meier, BB Blaimer, E Buenaventura, E Hartop… - …, 2022 - Wiley Online Library
Halting biodiversity decline is one of the most critical challenges for humanity, but monitoring
biodiversity is hampered by taxonomic impediments. One impediment is the large number of …

ONTbarcoder 2.0: rapid species discovery and identification with real‐time barcoding facilitated by Oxford Nanopore R10. 4

A Srivathsan, V Feng, D Suárez, B Emerson… - Cladistics, 2024 - Wiley Online Library
Most arthropod species are undescribed and hidden in specimen‐rich samples that are
difficult to sort to species using morphological characters. For such samples, sorting to …

Towards large-scale integrative taxonomy (LIT): resolving the data conundrum for dark taxa

E Hartop, A Srivathsan, F Ronquist… - Systematic Biology, 2022 - academic.oup.com
Abstract New, rapid, accurate, scalable, and cost-effective species discovery and
delimitation methods are needed for tackling “dark taxa,” here defined as groups for which …

DiversityScanner: Robotic handling of small invertebrates with machine learning methods

L Wührl, C Pylatiuk, M Giersch, F Lapp… - Molecular ecology …, 2022 - Wiley Online Library
Invertebrate biodiversity remains poorly understood although it comprises much of the
terrestrial animal biomass, most species and supplies many ecosystem services. The main …

Rapid, large-scale species discovery in hyperdiverse taxa using 1D MinION sequencing

A Srivathsan, E Hartop, J Puniamoorthy, WT Lee… - BMC biology, 2019 - Springer
Background More than 80% of all animal species remain unknown to science. Most of these
species live in the tropics and belong to animal taxa that combine small body size with high …

Rapid in situ identification of biological specimens via DNA amplicon sequencing using miniaturized laboratory equipment

A Pomerantz, K Sahlin, N Vasiljevic, A Seah, M Lim… - Nature …, 2022 - nature.com
In many parts of the world, human-mediated environmental change is depleting biodiversity
faster than it can be characterized, while invasive species cause agricultural damage …