[HTML][HTML] Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods

J Pawlowski, K Bruce, K Panksep, FI Aguirre… - Science of the Total …, 2022 - Elsevier
Environmental DNA (eDNA) metabarcoding (parallel sequencing of DNA/RNA for
identification of whole communities within a targeted group) is revolutionizing the field of …

How many species of insects and other terrestrial arthropods are there on Earth?

NE Stork - Annual review of entomology, 2018 - annualreviews.org
In the last decade, new methods of estimating global species richness have been developed
and existing ones improved through the use of more appropriate statistical tools and new …

[HTML][HTML] A DNA barcoding framework for taxonomic verification in the Darwin Tree of Life Project

AD Twyford, J Beasley, I Barnes, H Allen… - Wellcome Open …, 2024 - pmc.ncbi.nlm.nih.gov
Biodiversity genomics research requires reliable organismal identification, which can be
difficult based on morphology alone. DNA-based identification using DNA barcoding can …

Genetic diversity and conservation units: dealing with the species-population continuum in the age of genomics

DJ Coates, M Byrne, C Moritz - Frontiers in Ecology and Evolution, 2018 - frontiersin.org
Current approaches to biodiversity conservation are largely based on geographic areas,
ecosystems, ecological communities, and species, with less attention on genetic diversity …

The use of bioacoustics in anuran taxonomy: theory, terminology, methods and recommendations for best practice

J Koehler, M Jansen, A Rodriguez, PJR Kok, LF Toledo… - Zootaxa, 2017 - biotaxa.org
Vocalizations of anuran amphibians have received much attention in studies of behavioral
ecology and physiology, but also provide informative characters for identifying and …

Cryptic species as a window into the paradigm shift of the species concept

C Fišer, CT Robinson, F Malard - Molecular Ecology, 2018 - Wiley Online Library
The species concept is the cornerstone of biodiversity science, and any paradigm shift in the
delimitation of species affects many research fields. Many biologists now are embracing a …

Finding evolutionary processes hidden in cryptic species

TH Struck, JL Feder, M Bendiksby, S Birkeland… - Trends in Ecology & …, 2018 - cell.com
Cryptic species could represent a substantial fraction of biodiversity. However, inconsistent
definitions and taxonomic treatment of cryptic species prevent informed estimates of their …

Inordinate fondness multiplied and redistributed: the number of species on earth and the new pie of life

BB Larsen, EC Miller, MK Rhodes… - The Quarterly Review …, 2017 - journals.uchicago.edu
The number of species on Earth is one of the most fundamental numbers in science, but one
that remains highly uncertain. Clearly, more species exist than the present number of …

A DNA-based registry for all animal species: the Barcode Index Number (BIN) system

S Ratnasingham, PDN Hebert - PloS one, 2013 - journals.plos.org
Because many animal species are undescribed, and because the identification of known
species is often difficult, interim taxonomic nomenclature has often been used in biodiversity …

Ecosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap

T Cordier, L Alonso‐Sáez… - Molecular …, 2021 - Wiley Online Library
A decade after environmental scientists integrated high‐throughput sequencing
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …