Statistical analysis of particle trajectories in living cells

V Briane, C Kervrann, M Vimond - Physical Review E, 2018 - APS
Recent advances in molecular biology and fluorescence microscopy imaging have made
possible the inference of the dynamics of molecules in living cells. Such inference allows us …

BNP-Track: a framework for superresolved tracking

I Sgouralis, LWQ Xu, AP Jalihal, Z Kilic, NG Walter… - Nature …, 2024 - nature.com
Superresolution tools, such as PALM and STORM, provide nanoscale localization accuracy
by relying on rare photophysical events, limiting these methods to static samples. By …

A Bayesian framework for persistent homology

V Maroulas, F Nasrin, C Oballe - SIAM Journal on Mathematics of Data …, 2020 - SIAM
Persistence diagrams offer a way to summarize topological and geometric properties latent
in datasets. While several methods have been developed that use persistence diagrams in …

Signal classification with a point process distance on the space of persistence diagrams

A Marchese, V Maroulas - Advances in Data Analysis and Classification, 2018 - Springer
In this paper, we consider the problem of signal classification. First, the signal is translated
into a persistence diagram through the use of delay-embedding and persistent homology …

Adaptive meshfree backward SDE filter

F Bao, V Maroulas - SIAM Journal on Scientific Computing, 2017 - SIAM
An adaptive meshfree approach is proposed to solve the nonlinear filtering problem based
on forward backward stochastic differential equations. The algorithm relies on the fact that …

Improved distributed particle filters for tracking in a wireless sensor network

K Kang, V Maroulas, I Schizas, F Bao - Computational statistics & data …, 2018 - Elsevier
A novel distributed particle filter algorithm is presented, called drift homotopy likelihood
bridging particle filter (DHLB-PF). The DHLB-PF is designed to surmount the degeneracy …

A Bayesian topological framework for the identification and reconstruction of subcellular motion

I Sgouralis, A Nebenfuhr, V Maroulas - SIAM Journal on Imaging Sciences, 2017 - SIAM
Microscopy imaging allows detailed observations of intracellular movements and the
acquisition of large datasets that can be fully analyzed only by automated algorithms. Here …

Bayesian topological learning for brain state classification

F Nasrin, C Oballe, D Boothe… - 2019 18th IEEE …, 2019 - ieeexplore.ieee.org
Investigation of human brain states through electroencephalograph (EEG) signals is a
crucial step in human-machine communications. However, classifying and analyzing EEG …

[HTML][HTML] Sampling and filtering with Markov chains

MA Kouritzin - Signal Processing, 2024 - Elsevier
A new continuous-time Markov chain rate change formula is proven. This theorem is used to
derive existence and uniqueness of novel filtering equations akin to the Duncan–Mortensen …

Bayesian topological learning for classifying the structure of biological networks

V Maroulas, CP Micucci, F Nasrin - Bayesian Analysis, 2022 - projecteuclid.org
Actin cytoskeleton networks generate local topological signatures due to the natural
variations in the number, size, and shape of holes of the networks. Persistent homology is a …