YTHDF3 facilitates translation and decay of N6-methyladenosine-modified RNA

H Shi, X Wang, Z Lu, BS Zhao, H Ma, PJ Hsu, C Liu… - Cell research, 2017 - nature.com
Abstract N 6-methyladenosine (m 6 A) is the most abundant internal modification in
eukaryotic messenger RNAs (mRNAs), and plays important roles in cell differentiation and …

Comparative transcriptomics coupled to developmental grading via transgenic zebrafish reporter strains identifies conserved features in neutrophil maturation

S Kirchberger, MR Shoeb, D Lazic… - Nature …, 2024 - nature.com
Neutrophils are evolutionarily conserved innate immune cells playing pivotal roles in host
defense. Zebrafish models have contributed substantially to our understanding of neutrophil …

Spatial organization of the flow of genetic information in bacteria

P Montero Llopis, AF Jackson, O Sliusarenko… - Nature, 2010 - nature.com
Eukaryotic cells spatially organize mRNA processes such as translation and mRNA decay.
Much less is clear in bacterial cells where the spatial distribution of mature mRNA remains …

Engineering spatiotemporal organization and dynamics in synthetic cells

A Groaz, H Moghimianavval, F Tavella… - Wiley …, 2021 - Wiley Online Library
Constructing synthetic cells has recently become an appealing area of research. Decades of
research in biochemistry and cell biology have amassed detailed part lists of components …

An RNA-based theory of natural universal computation

H Akhlaghpour - Journal of Theoretical Biology, 2022 - Elsevier
Life is confronted with computation problems in a variety of domains including animal
behavior, single-cell behavior, and embryonic development. Yet we currently do not know of …

Kinetic and structural comparison of a protein's cotranslational folding and refolding pathways

AJ Samelson, E Bolin, SM Costello, AK Sharma… - Science …, 2018 - science.org
Precise protein folding is essential for the survival of all cells, and protein misfolding causes
a number of diseases that lack effective therapies, yet the general principles governing …

[HTML][HTML] Size matters: how periodicity and depth of LIPSS influences E. coli adhesion on ferritic stainless steel

J Outón, M Carbú, M Domínguez… - Applied Surface …, 2024 - Elsevier
Bacterial adhesion is a serious problem in the healthcare and food industries, causing
health problems and economic losses. This study evaluates the generation of Laser-Induced …

Systems biophysics of gene expression

JMG Vilar, L Saiz - Biophysical journal, 2013 - cell.com
Gene expression is a process central to any form of life. It involves multiple temporal and
functional scales that extend from specific protein-DNA interactions to the coordinated …

Cas9-assisted biological containment of a genetically engineered human commensal bacterium and genetic elements

N Hayashi, Y Lai, J Fuerte-Stone, M Mimee… - Nature …, 2024 - nature.com
Sophisticated gene circuits built by synthetic biology can enable bacteria to sense their
environment and respond predictably. Engineered biosensing bacteria outfitted with such …

RT-qPCR based quantitative analysis of gene expression in single bacterial cells

W Gao, W Zhang, DR Meldrum - Journal of Microbiological Methods, 2011 - Elsevier
Recent evidence suggests that cell-to-cell difference at the gene expression level is an order
of magnitude greater than previously thought even for isogenic bacterial populations. Such …