The expanding spectrum of diketopiperazine natural product biosynthetic pathways containing cyclodipeptide synthases

P Borgman, RD Lopez, AL Lane - Organic & biomolecular chemistry, 2019 - pubs.rsc.org
Microorganisms are remarkable chemists, with enzymes as their tools for executing multi-
step syntheses to yield myriad natural products. Microbial synthetic aptitudes are illustrated …

Aminoacyl-tRNA-utilizing enzymes in natural product biosynthesis

M Moutiez, P Belin, M Gondry - Chemical reviews, 2017 - ACS Publications
Aminoacyl-tRNAs were long thought to be involved solely in ribosome-dependent protein
synthesis and essential primary metabolism processes, such as targeted protein …

Cyclodipeptide synthases: a promising biotechnological tool for the synthesis of diverse 2, 5-diketopiperazines

N Canu, M Moutiez, P Belin, M Gondry - Natural product reports, 2020 - pubs.rsc.org
Covering: Up to mid-2019 Cyclodipeptide synthases (CDPSs) catalyse the formation of
cyclodipeptides using aminoacylated-tRNA as substrates. The recent characterization of …

Directed evolution of a cyclodipeptide synthase with new activities via label-free mass spectrometric screening

S Zhang, J Zhu, S Fan, W **e, Z Yang, T Si - Chemical Science, 2022 - pubs.rsc.org
Directed evolution is a powerful approach to engineer enzymes via iterative creation and
screening of variant libraries. However, assay development for high-throughput mutant …

Cyclodipeptide oxidase is an enzyme filament

MP Andreas, TW Giessen - Nature Communications, 2024 - nature.com
Modified cyclic dipeptides represent a widespread class of secondary metabolites with
diverse pharmacological activities, including antibacterial, antifungal, and antitumor. Here …

Genome mining of cyclodipeptide synthases unravels unusual tRNA-dependent diketopiperazine-terpene biosynthetic machinery

T Yao, J Liu, Z Liu, T Li, H Li, Q Che, T Zhu, D Li… - Nature …, 2018 - nature.com
Cyclodipeptide synthases (CDPSs) can catalyze the formation of two successive peptide
bonds by hijacking aminoacyl-tRNAs from the ribosomal machinery resulting in …

A comprehensive overview of the cyclodipeptide synthase family enriched with the characterization of 32 new enzymes

M Gondry, IB Jacques, R Thai, M Babin… - Frontiers in …, 2018 - frontiersin.org
Cyclodipeptide synthases (CDPSs) use as substrates two amino acids activated as
aminoacyl-tRNAs to synthesize cyclodipeptides in secondary metabolites biosynthetic …

Analysis of 51 cyclodipeptide synthases reveals the basis for substrate specificity

IB Jacques, M Moutiez, J Witwinowski… - Nature chemical …, 2015 - nature.com
Cyclodipeptide synthases (CDPSs) constitute a family of peptide bond–forming enzymes
that use aminoacyl-tRNAs for the synthesis of cyclodipeptides. Here, we describe the activity …

Non‐canonical roles of tRNAs and tRNA mimics in bacterial cell biology

A Katz, S Elgamal, A Rajkovic, M Ibba - Molecular microbiology, 2016 - Wiley Online Library
Transfer RNAs (tRNAs) are the macromolecules that transfer activated amino acids from
aminoacyl‐tRNA synthetases to the ribosome, where they are used for the mRNA guided …

Structure and tRNA specificity of MibB, a lantibiotic dehydratase from Actinobacteria involved in NAI-107 biosynthesis

MA Ortega, Y Hao, MC Walker, S Donadio, M Sosio… - Cell chemical …, 2016 - cell.com
Class I lantibiotic dehydratases dehydrate selected Ser/Thr residues of a precursor peptide.
Recent studies demonstrated the requirement of glutamyl-tRNA Glu for Ser/Thr activation by …