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Recent advances and applications of machine learning in experimental solid mechanics: A review
For many decades, experimental solid mechanics has played a crucial role in characterizing
and understanding the mechanical properties of natural and novel artificial materials …
and understanding the mechanical properties of natural and novel artificial materials …
Establishing a conceptual framework for holistic cell states and state transitions
SM Rafelski, JA Theriot - Cell, 2024 - cell.com
Cell states were traditionally defined by how they looked, where they were located, and what
functions they performed. In this post-genomic era, the field is largely focused on a …
functions they performed. In this post-genomic era, the field is largely focused on a …
[HTML][HTML] Integrated intracellular organization and its variations in human iPS cells
Understanding how a subset of expressed genes dictates cellular phenotype is a
considerable challenge owing to the large numbers of molecules involved, their …
considerable challenge owing to the large numbers of molecules involved, their …
Advances in spatial transcriptomic data analysis
Spatial transcriptomics is a rapidly growing field that promises to comprehensively
characterize tissue organization and architecture at the single-cell or subcellular resolution …
characterize tissue organization and architecture at the single-cell or subcellular resolution …
Spatial Transcriptomics-correlated Electron Microscopy maps transcriptional and ultrastructural responses to brain injury
P Androvic, M Schifferer, K Perez Anderson… - Nature …, 2023 - nature.com
Understanding the complexity of cellular function within a tissue necessitates the
combination of multiple phenotypic readouts. Here, we developed a method that links …
combination of multiple phenotypic readouts. Here, we developed a method that links …
Self-supervised deep learning encodes high-resolution features of protein subcellular localization
Explaining the diversity and complexity of protein localization is essential to fully understand
cellular architecture. Here we present cytoself, a deep-learning approach for fully self …
cellular architecture. Here we present cytoself, a deep-learning approach for fully self …
Multimodal charting of molecular and functional cell states via in situ electro-sequencing
Paired map** of single-cell gene expression and electrophysiology is essential to
understand gene-to-function relationships in electrogenic tissues. Here, we developed in …
understand gene-to-function relationships in electrogenic tissues. Here, we developed in …
A comprehensive analysis of gene expression changes in a high replicate and open-source dataset of differentiating hiPSC-derived cardiomyocytes
T Grancharova, KA Gerbin, AB Rosenberg, CM Roco… - Scientific Reports, 2021 - nature.com
We performed a comprehensive analysis of the transcriptional changes occurring during
human induced pluripotent stem cell (hiPSC) differentiation to cardiomyocytes. Using single …
human induced pluripotent stem cell (hiPSC) differentiation to cardiomyocytes. Using single …
Optofluidic imaging meets deep learning: from merging to emerging
Propelled by the striking advances in optical microscopy and deep learning (DL), the role of
imaging in lab-on-a-chip has dramatically been transformed from a silo inspection tool to a …
imaging in lab-on-a-chip has dramatically been transformed from a silo inspection tool to a …
Transcriptomic entropy benchmarks stem cell-derived cardiomyocyte maturation against endogenous tissue at single cell level
The immaturity of pluripotent stem cell (PSC)-derived tissues has emerged as a universal
problem for their biomedical applications. While efforts have been made to generate adult …
problem for their biomedical applications. While efforts have been made to generate adult …