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The HADDOCK2. 4 web server for integrative modeling of biomolecular complexes
Interactions between macromolecules, such as proteins and nucleic acids, are essential for
cellular functions. Experimental methods can fail to provide all the information required to …
cellular functions. Experimental methods can fail to provide all the information required to …
Protein structural bioinformatics: An overview
V de Almeida Paiva, I de Souza Gomes… - Computers in Biology …, 2022 - Elsevier
Proteins play a crucial role in organisms in nature. They are able to perform structural,
catalytic, transport and defense functions in cells, among others. We understand that a …
catalytic, transport and defense functions in cells, among others. We understand that a …
[HTML][HTML] ATG9A and ATG2A form a heteromeric complex essential for autophagosome formation
Summary ATG9A and ATG2A are essential core members of the autophagy machinery.
ATG9A is a lipid scramblase that allows equilibration of lipids across a membrane bilayer …
ATG9A is a lipid scramblase that allows equilibration of lipids across a membrane bilayer …
Targeting the postsynaptic scaffolding protein PSD-95 enhances BDNF signaling to mitigate depression-like behaviors in mice
X Shi, X Zhou, G Chen, W Luo, C Zhou, T He… - Science …, 2024 - science.org
Signaling mediated by brain-derived neurotrophic factor (BDNF), which is supported by the
postsynaptic scaffolding protein PSD-95, has antidepressant effects. Conversely, clinical …
postsynaptic scaffolding protein PSD-95, has antidepressant effects. Conversely, clinical …
LAG3 ectodomain structure reveals functional interfaces for ligand and antibody recognition
The immune checkpoint receptor lymphocyte activation gene 3 protein (LAG3) inhibits T cell
function upon binding to major histocompatibility complex class II (MHC class II) or …
function upon binding to major histocompatibility complex class II (MHC class II) or …
DNA G-quadruplex recognition in vitro and in live cells by a structure-specific nanobody
G-quadruplexes (G4s) are four-stranded DNA secondary structures that occur in the human
genome and play key roles in transcription, replication, and genome stability. G4-specific …
genome and play key roles in transcription, replication, and genome stability. G4-specific …
Immunoinformatics design of a structural proteins driven multi-epitope candidate vaccine against different SARS-CoV-2 variants based on fynomer
The ideal vaccines for combating diseases that may emerge in the future require more than
simply inactivating a few pathogenic strains. This study aims to provide a peptide-based …
simply inactivating a few pathogenic strains. This study aims to provide a peptide-based …
Phosphoantigen sensing combines TCR-dependent recognition of the BTN3A IgV domain and germline interaction with BTN2A1
Summary Vγ9Vδ2 T cells play critical roles in microbial immunity by detecting target cells
exposed to pathogen-derived phosphoantigens (P-Ags). Target cell expression of BTN3A1 …
exposed to pathogen-derived phosphoantigens (P-Ags). Target cell expression of BTN3A1 …
Structural predictions of protein–DNA binding: MELD-DNA
Structural, regulatory and enzymatic proteins interact with DNA to maintain a healthy and
functional genome. Yet, our structural understanding of how proteins interact with DNA is …
functional genome. Yet, our structural understanding of how proteins interact with DNA is …
[HTML][HTML] Regulation of STING activity in DNA sensing by ISG15 modification
Sensing of human immunodeficiency virus type 1 (HIV-1) DNA is mediated by the cyclic
GMP-AMP synthase-stimulator of interferon genes (cGAS-STING) signaling axis. Signal …
GMP-AMP synthase-stimulator of interferon genes (cGAS-STING) signaling axis. Signal …