Proteomics technologies for cancer liquid biopsies

Z Ding, N Wang, N Ji, ZS Chen - Molecular Cancer, 2022 - Springer
Alterations in DNAs could not reveal what happened in proteins. The accumulated
alterations of DNAs would change the manifestation of proteins. Therefore, as is the case in …

Src: coordinating metabolism in cancer

SG Pelaz, A Tabernero - Oncogene, 2022 - nature.com
Metabolism must be tightly regulated to fulfil the dynamic requirements of cancer cells during
proliferation, migration, stemness and differentiation. Src is a node of several signals …

Pan-cancer analyses reveal genomic features of FOXM1 overexpression in cancer

CJ Barger, C Branick, L Chee, AR Karpf - Cancers, 2019 - mdpi.com
FOXM1 is frequently overexpressed in cancer, but this has not been studied in a
comprehensive manner. We utilized genotype-tissue expression (GTEx) normal and The …

[HTML][HTML] Pan-cancer profiles of the cuproptosis gene set

H Liu - American journal of cancer research, 2022 - ncbi.nlm.nih.gov
A recent study has revealed a novel cell death pathway, called “cuproptosis”, a programmed
cell death based on copper. A total of 12 genes were involved in the cuproptosis pathway …

Hypoxanthine phosphoribosyl transferase 1 metabolizes temozolomide to activate AMPK for driving chemoresistance of glioblastomas

J Yin, X Wang, X Ge, F Ding, Z Shi, Z Ge… - Nature …, 2023 - nature.com
Temozolomide (TMZ) is a standard treatment for glioblastoma (GBM) patients. However,
TMZ has moderate therapeutic effects due to chemoresistance of GBM cells through less …

Comprehensive review of web servers and bioinformatics tools for cancer prognosis analysis

H Zheng, G Zhang, L Zhang, Q Wang, H Li… - Frontiers in …, 2020 - frontiersin.org
Prognostic biomarkers are of great significance to predict the outcome of patients with
cancer, to guide the clinical treatments, to elucidate tumorigenesis mechanisms, and offer …

Integration of online omics-data resources for cancer research

T Das, G Andrieux, M Ahmed, S Chakraborty - Frontiers in Genetics, 2020 - frontiersin.org
The manifestations of cancerous phenotypes necessitate alterations at different levels of
information-flow from genome to proteome. The molecular alterations at different information …

E6-mediated activation of JNK drives EGFR signalling to promote proliferation and viral oncoprotein expression in cervical cancer

EL Morgan, JA Scarth, MR Patterson… - Cell Death & …, 2021 - nature.com
Human papillomaviruses (HPV) are a major cause of malignancy worldwide, contributing
to~ 5% of all human cancers including almost all cases of cervical cancer and a growing …

A protein expression atlas on tissue samples and cell lines from cancer patients provides insights into tumor heterogeneity and dependencies

J Li, W Liu, K Mojumdar, H Kim, Z Zhou, Z Ju… - Nature Cancer, 2024 - nature.com
Abstract The Cancer Genome Atlas (TCGA) and the Cancer Cell Line Encyclopedia (CCLE)
are foundational resources in cancer research, providing extensive molecular and …

Integration of transcriptomics, proteomics, and metabolomics data to reveal HER2-associated metabolic heterogeneity in gastric cancer with response to …

Q Yuan, D Deng, C Pan, J Ren, T Wei, Z Wu… - Frontiers in …, 2022 - frontiersin.org
Background Currently available prognostic tools and focused therapeutic methods result in
unsatisfactory treatment of gastric cancer (GC). A deeper understanding of human epidermal …