Transcriptomics in advancing portunid aquaculture: A systematic review

K Waiho, M Ikhwanuddin, N Afiqah‐Aleng… - Reviews in …, 2022 - Wiley Online Library
The rapid advancement of next‐generation sequencing technologies has promoted the use
of transcriptomics in non‐model organisms, including species in the aquaculture sector …

Impacts of petroleum, petroleum components, and dispersants on organisms and populations

SA Murawski, M Grosell, C Smith, T Sutton… - Oceanography, 2021 - JSTOR
Following the Deepwater Horizon blowout, oil, degraded oil, oil mixed with dispersants, and
management responses to the spill affected a variety of Gulf of Mexico organisms. This …

Understanding molt control switches: Transcriptomic and expression analysis of the genes involved in ecdysteroidogenesis and cholesterol uptake pathways in the Y …

E Legrand, T Bachvaroff, TB Schock, JS Chung - PLoS One, 2021 - journals.plos.org
The crustacean molting process is regulated by an interplay of hormones produced by the
eyestalk ganglia and Y-organs (YO). Molt-inhibiting hormone and crustacean hyperglycemic …

Crude oil impairs immune function and increases susceptibility to pathogenic bacteria in southern flounder

KM Bayha, N Ortell, CN Ryan, KJ Griffitt, M Krasnec… - PLoS …, 2017 - journals.plos.org
Exposure to crude oil or its individual constituents can have detrimental impacts on fish
species, including impairment of the immune response. Increased observations of skin …

A toxicogenomics approach to screen chlorinated flame retardants tris (2‐chloroethyl) phosphate and tris (2‐chloroisopropyl) phosphate for potential health effects

BV Krivoshiev, GTS Beemster… - Journal of Applied …, 2018 - Wiley Online Library
Abstract Tris (2‐chloroethyl) phosphate (TCEP) is a pervasive flame retardant that has been
identified as a chemical of concern given its health effects and therefore its use has since …

Molecular mechanism of ethylene stimulation of latex yield in rubber tree (Hevea brasiliensis) revealed by de novo sequencing and transcriptome analysis

JP Liu, YF Zhuang, XL Guo, YJ Li - BMC genomics, 2016 - Springer
Abstract Background Rubber tree (Hevea brasiliensis) is an important industrial crop
cultivated in tropical areas for natural rubber production. Treatment of the bark of rubber …

Transcriptomic analysis of Portunus trituberculatus reveals a critical role for WNT4 and WNT signalling in limb regeneration

L Liu, Y Fu, F Zhu, C Mu, R Li, W Song, C Shi, Y Ye… - Gene, 2018 - Elsevier
The swimming crab (Portunus trituberculatus) is among the most economically important
seawater crustacean species in Asia. Despite its commercial importance and being well …

RNA profile diversity across arthropoda: guidelines, methodological artifacts, and expected outcomes

DM DeLeo, JL Pérez-Moreno… - Biology Methods and …, 2018 - academic.oup.com
High-quality RNA is an important precursor for high-throughput RNA sequencing (RNAseq)
and subsequent analyses. However, the primary metric used to assess RNA quality, the …

Characterization of the molecular differential responses in marine benthic macroinvertebrates exposed to polycyclic aromatic hydrocarbons

AP Onyena, CS Manohar, JA Nkwoji, LO Chukwu - Aquatic Ecology, 2024 - Springer
Polycyclic aromatic hydrocarbons (PAHs) are organic chemicals that can induce oxidative
stress, genotoxicity, immunotoxicity, endocrine disruption, and developmental toxicity and …

Toxicity of petroleum hydrocarbons to Brachyuran crabs: a review of deleterious effects of oil-related xenobiotics on life stages

Q Karam, Z Al-Wazzan - Journal of the Marine Biological Association …, 2021 - cambridge.org
Petroleum hydrocarbons (PH) toxicity and bioaccumulation in aquatic organisms have been
investigated for almost 50 years. Continuous oil spillages necessitate a further …