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Recent developments and applications of the MMPBSA method
The Molecular Mechanics Poisson-Boltzmann Surface Area (MMPBSA) approach has been
widely applied as an efficient and reliable free energy simulation method to model molecular …
widely applied as an efficient and reliable free energy simulation method to model molecular …
New insights into protein–protein interaction modulators in drug discovery and therapeutic advance
Protein-protein interactions (PPIs) are fundamental to cellular signaling and transduction
which marks them as attractive therapeutic drug development targets. What were once …
which marks them as attractive therapeutic drug development targets. What were once …
Exploring the binding mechanism of pumpkin seed protein and apigenin: Spectroscopic analysis, molecular docking and molecular dynamics simulation
F Liang, Y Shi, J Shi, WW Cao - Food Hydrocolloids, 2023 - Elsevier
Apigenin is a vital flavonoid that has attracted considerable attention in recent years due to
its potent health benefits. Pumpkin seed protein (PSP) is a valuable by-product after …
its potent health benefits. Pumpkin seed protein (PSP) is a valuable by-product after …
Postharvest ripening of newly harvested corn: Weakened interactions between starch and protein
N Hu, W Qi, J Zhu, S Li, M Zheng, C Zhao, J Liu - Food Chemistry, 2024 - Elsevier
The effects of postharvest ripening of corn on the mechanisms of starch and protein
interactions were investigated using molecular dynamics and several chemical substances …
interactions were investigated using molecular dynamics and several chemical substances …
[HTML][HTML] Molecular structure-based screening of the constituents of Calotropis procera identifies potential inhibitors of diabetes mellitus target alpha glucosidase
CA Adinortey, GB Kwarko, R Koranteng… - Current Issues in …, 2022 - mdpi.com
Diabetes mellitus is a disorder characterized by higher levels of blood glucose due to
impaired insulin mechanisms. Alpha glucosidase is a critical drug target implicated in the …
impaired insulin mechanisms. Alpha glucosidase is a critical drug target implicated in the …
Plas-5k: Dataset of protein-ligand affinities from molecular dynamics for machine learning applications
Computational methods and recently modern machine learning methods have played a key
role in structure-based drug design. Though several benchmarking datasets are available …
role in structure-based drug design. Though several benchmarking datasets are available …
Innovative screening for functional improved aromatic amine derivatives: Toxicokinetics, free radical oxidation pathway and carcinogenic adverse outcome pathway
Y Liu, X Li, Q Pu, R Fu, Z Wang, Y Li, X Li - Journal of Hazardous Materials, 2023 - Elsevier
Aromatic amines, one of the most widely used low-cost antioxidants in rubbers, have been
regarded as pollutants with human health concerns. To overcome this problem, this study …
regarded as pollutants with human health concerns. To overcome this problem, this study …
Across the blood-brain barrier: Neurotherapeutic screening and characterization of naringenin as a novel CRMP-2 inhibitor in the treatment of Alzheimer's disease …
The discovery and developmental processes of CNS drugs have been limited by the inability
of potential drug molecules to pass through the blood-brain barrier (BBB). This presents a …
of potential drug molecules to pass through the blood-brain barrier (BBB). This presents a …
[HTML][HTML] Computational Screening of T-Muurolol for an Alternative Antibacterial Solution against Staphylococcus aureus Infections: An In Silico Approach for …
Staphylococcus aureus infections present a significant threat to the global healthcare
system. The increasing resistance to existing antibiotics and their limited efficacy …
system. The increasing resistance to existing antibiotics and their limited efficacy …
Exploration of binding mechanism of whey protein isolate and proanthocyanidin: Spectroscopic analysis and molecular dynamics simulation
D Guo, C Chen, Q Pan, M Sun, H Wang, Y Yi… - Food Research …, 2024 - Elsevier
The non-covalent whey protein isolate-proanthocyanidin (WPI-PC) complex was constructed
and possessed superior anti-muscle attenuation activity in our previous study. While the non …
and possessed superior anti-muscle attenuation activity in our previous study. While the non …