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Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information
Background Cell-cell interactions are important for information exchange between different
cells, which are the fundamental basis of many biological processes. Recent advances in …
cells, which are the fundamental basis of many biological processes. Recent advances in …
Heat stress destabilizes symbiotic nutrient cycling in corals
Recurrent mass bleaching events are pushing coral reefs worldwide to the brink of
ecological collapse. While the symptoms and consequences of this breakdown of the coral …
ecological collapse. While the symptoms and consequences of this breakdown of the coral …
[HTML][HTML] Transcriptional reprogramming of distinct peripheral sensory neuron subtypes after axonal injury
Primary somatosensory neurons are specialized to transmit specific types of sensory
information through differences in cell size, myelination, and the expression of distinct …
information through differences in cell size, myelination, and the expression of distinct …
[HTML][HTML] Single-cell profiling of Arabidopsis leaves to Pseudomonas syringae infection
Plant response to pathogen infection varies within a leaf, yet this heterogeneity is not well
resolved. We expose Arabidopsis to Pseudomonas syringae or mock treatment and profile> …
resolved. We expose Arabidopsis to Pseudomonas syringae or mock treatment and profile> …
PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants
With the goal of providing a comprehensive, high-quality resource for both plant transcription
factors (TFs) and their regulatory interactions with target genes, we upgraded plant TF …
factors (TFs) and their regulatory interactions with target genes, we upgraded plant TF …
[HTML][HTML] Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding
Hybrid potato breeding will transform the crop from a clonally propagated tetraploid to a
seed-reproducing diploid. Historical accumulation of deleterious mutations in potato …
seed-reproducing diploid. Historical accumulation of deleterious mutations in potato …
Phased, chromosome-scale genome assemblies of tetraploid potato reveal a complex genome, transcriptome, and predicted proteome landscape underpinning …
Cultivated potato is a clonally propagated autotetraploid species with a highly
heterogeneous genome. Phased assemblies of six cultivars including two chromosome …
heterogeneous genome. Phased assemblies of six cultivars including two chromosome …
DNA methylation in newborns and maternal smoking in pregnancy: genome-wide consortium meta-analysis
Epigenetic modifications, including DNA methylation, represent a potential mechanism for
environmental impacts on human disease. Maternal smoking in pregnancy remains an …
environmental impacts on human disease. Maternal smoking in pregnancy remains an …
Behavioral and genetic mechanisms of social evolution: insights from incipiently and facultatively social bees
Facultatively social species exhibit behavioral plasticity in response to changes in ecological
conditions and social environment, and thus provide a natural experiment to compare …
conditions and social environment, and thus provide a natural experiment to compare …
Temperature optima of a natural diatom population increases as global warming proceeds
Studies in laboratory-based experimental evolution have demonstrated that phytoplankton
species can rapidly adapt to higher temperatures. However, adaptation processes and their …
species can rapidly adapt to higher temperatures. However, adaptation processes and their …