[HTML][HTML] Past, present, and future perspectives of environmental DNA (eDNA) metabarcoding: A systematic review in methods, monitoring, and applications of global …

KM Ruppert, RJ Kline, MS Rahman - Global Ecology and Conservation, 2019‏ - Elsevier
Environmental DNA (eDNA) metabarcoding is a novel method of assessing biodiversity
wherein samples are taken from the environment via water, sediment or air from which DNA …

The ecology of environmental DNA and implications for conservation genetics

MA Barnes, CR Turner - Conservation genetics, 2016‏ - Springer
Environmental DNA (eDNA) refers to the genetic material that can be extracted from bulk
environmental samples such as soil, water, and even air. The rapidly expanding study of …

Non‐specific amplification compromises environmental DNA metabarcoding with COI

RA Collins, J Bakker, OS Wangensteen… - Methods in Ecology …, 2019‏ - Wiley Online Library
Metabarcoding extra‐organismal DNA from environmental samples is now a key technique
in aquatic biomonitoring and ecosystem health assessment. Of critical consideration when …

Future of DNA-based insect monitoring

PYS Chua, SJ Bourlat, C Ferguson, P Korlevic, L Zhao… - Trends in Genetics, 2023‏ - cell.com
Insects are crucial for ecosystem health but climate change and pesticide use are driving
massive insect decline. To mitigate this loss, we need new and effective monitoring …

Towards robust and repeatable sampling methods in eDNA‐based studies

IA Dickie, S Boyer, HL Buckley… - Molecular Ecology …, 2018‏ - Wiley Online Library
DNA‐based techniques are increasingly used for measuring the biodiversity (species
presence, identity, abundance and community composition) of terrestrial and aquatic …

Why the COI barcode should be the community DNA metabarcode for the metazoa

C Andújar, P Arribas, DW Yu, AP Vogler, BC Emerson - 2018‏ - Wiley Online Library
Metabarcoding of complex metazoan communities is increasingly being used to measure
biodiversity in terrestrial, freshwater and marine ecosystems, revolutionizing our ability to …

Methods for the extraction, storage, amplification and sequencing of DNA from environmental samples

G Lear, I Dickie, J Banks, S Boyer, HL Buckley… - New Zealand Journal of …, 2018‏ - JSTOR
Advances in the sequencing of DNA extracted from media such as soil and water offer huge
opportunities for biodiversity monitoring and assessment, particularly where the collection or …

Body size determines soil community assembly in a tropical forest

L Zinger, P Taberlet, H Schimann, A Bonin… - Molecular …, 2019‏ - Wiley Online Library
Tropical forests shelter an unparalleled biological diversity. The relative influence of
environmental selection (ie, abiotic conditions, biotic interactions) and stochastic–distance …

DNA metabarcoding of insects and allies: an evaluation of primers and pipelines

GJ Brandon-Mong, HM Gan, KW Sing… - Bulletin of …, 2015‏ - cambridge.org
Metabarcoding, the coupling of DNA-based species identification and high-throughput
sequencing, offers enormous promise for arthropod biodiversity studies but factors such as …

Performance of amplicon and shotgun sequencing for accurate biomass estimation in invertebrate community samples

I Bista, GR Carvalho, M Tang, K Walsh… - Molecular Ecology …, 2018‏ - Wiley Online Library
New applications of DNA and RNA sequencing are expanding the field of biodiversity
discovery and ecological monitoring, yet questions remain regarding precision and …