The coupling hypothesis: why genome scans may fail to map local adaptation genes
Genomic scans of multiple populations often reveal marker loci with greatly increased
differentiation between populations. Often this differentiation coincides in space with …
differentiation between populations. Often this differentiation coincides in space with …
Application of SNPs for population genetics of nonmodel organisms: new opportunities and challenges
SJ Helyar, J Hemmer‐Hansen… - Molecular ecology …, 2011 - Wiley Online Library
Recent improvements in the speed, cost and accuracy of next generation sequencing are
revolutionizing the discovery of single nucleotide polymorphisms (SNPs). SNPs are …
revolutionizing the discovery of single nucleotide polymorphisms (SNPs). SNPs are …
Stacks: an analysis tool set for population genomics
Massively parallel short‐read sequencing technologies, coupled with powerful software
platforms, are enabling investigators to analyse tens of thousands of genetic markers. This …
platforms, are enabling investigators to analyse tens of thousands of genetic markers. This …
Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags
Next-generation sequencing technology provides novel opportunities for gathering genome-
scale sequence data in natural populations, laying the empirical foundation for the evolving …
scale sequence data in natural populations, laying the empirical foundation for the evolving …
SNP‐array reveals genome‐wide patterns of geographical and potential adaptive divergence across the natural range of Atlantic salmon (Salmo salar)
Atlantic salmon (S almo salar) is one of the most extensively studied fish species in the world
due to its significance in aquaculture, fisheries and ongoing conservation efforts to protect …
due to its significance in aquaculture, fisheries and ongoing conservation efforts to protect …
Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring
The Atlantic herring (Clupea harengus), one of the most abundant marine fishes in the
world, has historically been a critical food source in Northern Europe. It is one of the few …
world, has historically been a critical food source in Northern Europe. It is one of the few …
Adaptation to Low Salinity Promotes Genomic Divergence in Atlantic Cod ( Gadus morhua L.)
How genomic selection enables species to adapt to divergent environments is a
fundamental question in ecology and evolution. We investigated the genomic signatures of …
fundamental question in ecology and evolution. We investigated the genomic signatures of …
Environmental selection on transcriptome‐derived SNPs in a high gene flow marine fish, the Atlantic herring (Clupea harengus)
High gene flow is considered the norm for most marine organisms and is expected to limit
their ability to adapt to local environments. Few studies have directly compared the patterns …
their ability to adapt to local environments. Few studies have directly compared the patterns …
Parallel adaptive evolution of Atlantic cod on both sides of the Atlantic Ocean in response to temperature
IR Bradbury, S Hubert, B Higgins… - … of the Royal …, 2010 - royalsocietypublishing.org
Despite the enormous economic and ecological importance of marine organisms, the spatial
scales of adaptation and biocomplexity remain largely unknown. Yet, the preservation of …
scales of adaptation and biocomplexity remain largely unknown. Yet, the preservation of …
Outlier SNP markers reveal fine‐scale genetic structuring across European hake populations (Merluccius merluccius)
Shallow population structure is generally reported for most marine fish and explained as a
consequence of high dispersal, connectivity and large population size. Targeted gene …
consequence of high dispersal, connectivity and large population size. Targeted gene …