The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update
Nucleic Acids Research, 2022 - academic.oup.com
Galaxy is a mature, browser accessible workbench for scientific computing. It enables
scientists to share, analyze and visualize their own data, with minimal technical …
scientists to share, analyze and visualize their own data, with minimal technical …
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
Abstract Galaxy (homepage: https://galaxyproject. org, main public server: https://usegalaxy.
org) is a web-based scientific analysis platform used by tens of thousands of scientists …
org) is a web-based scientific analysis platform used by tens of thousands of scientists …
Selection analysis identifies clusters of unusual mutational changes in Omicron lineage BA. 1 that likely impact Spike function
Among the 30 nonsynonymous nucleotide substitutions in the Omicron S-gene are 13 that
have only rarely been seen in other SARS-CoV-2 sequences. These mutations cluster within …
have only rarely been seen in other SARS-CoV-2 sequences. These mutations cluster within …
Detection of SARS-CoV-2 intra-host recombination during superinfection with Alpha and Epsilon variants in New York City
Recombination is an evolutionary process by which many pathogens generate diversity and
acquire novel functions. Although a common occurrence during coronavirus replication …
acquire novel functions. Although a common occurrence during coronavirus replication …
[HTML][HTML] Selection analysis identifies unusual clustered mutational changes in Omicron lineage BA. 1 that likely impact Spike function
Among the 30 non-synonymous nucleotide substitutions in the Omicron S-gene are 13 that
have only rarely been seen in other SARS-CoV-2 sequences. These mutations cluster within …
have only rarely been seen in other SARS-CoV-2 sequences. These mutations cluster within …
[HTML][HTML] Genomic evidence for divergent co-infections of co-circulating SARS-CoV-2 lineages
Co-infection of RNA viruses may contribute to their recombination and cause severe clinical
symptoms. However, the tracking and identification of SARS-CoV-2 co-infection persist as …
symptoms. However, the tracking and identification of SARS-CoV-2 co-infection persist as …
Design of SARS-CoV-2 variant-specific pcr assays considering regional and temporal characteristics
Monitoring the prevalence of SARS-CoV-2 variants is necessary to make informed public
health decisions during the COVID-19 pandemic. PCR assays have received global …
health decisions during the COVID-19 pandemic. PCR assays have received global …
WorkflowHub: a registry for computational workflows
The rising popularity of computational workflows is driven by the need for repetitive and
scalable data processing, sharing of processing know-how, and transparent methods. As …
scalable data processing, sharing of processing know-how, and transparent methods. As …
CoVigator—A Knowledge Base for Navigating SARS-CoV-2 Genomic Variants
Background: The outbreak of the severe acute respiratory syndrome coronavirus-2 (SARS-
CoV-2) resulted in the global COVID-19 pandemic. The urgency for an effective SARS-CoV …
CoV-2) resulted in the global COVID-19 pandemic. The urgency for an effective SARS-CoV …
[HTML][HTML] Sierra SARS-CoV-2 sequence and antiviral resistance analysis program
Introduction Although most laboratories are capable of employing established protocols to
perform full-genome SARS-CoV-2 sequencing, many are unable to assess sequence …
perform full-genome SARS-CoV-2 sequencing, many are unable to assess sequence …