Genomics and the origin of species

O Seehausen, RK Butlin, I Keller, CE Wagner… - Nature Reviews …, 2014 - nature.com
Speciation is a fundamental evolutionary process, the knowledge of which is crucial for
understanding the origins of biodiversity. Genomic approaches are an increasingly …

The genetic causes of convergent evolution

DL Stern - Nature Reviews Genetics, 2013 - nature.com
The evolution of phenotypic similarities between species, known as convergence, illustrates
that populations can respond predictably to ecological challenges. Convergence often …

A beginner's guide to low‐coverage whole genome sequencing for population genomics

RN Lou, A Jacobs, AP Wilder… - Molecular …, 2021 - Wiley Online Library
Low‐coverage whole genome sequencing (lcWGS) has emerged as a powerful and cost‐
effective approach for population genomic studies in both model and nonmodel species …

Genetics of adaptation

K Bomblies, CL Peichel - Proceedings of the National …, 2022 - National Acad Sciences
The rediscovery of Mendel's work showing that the heredity of phenotypes is controlled by
discrete genes was followed by the reconciliation of Mendelian genetics with evolution by …

Recombination rate variation shapes barriers to introgression across butterfly genomes

SH Martin, JW Davey, C Salazar, CD Jiggins - PLoS biology, 2019 - journals.plos.org
Hybridisation and introgression can dramatically alter the relationships among groups of
species, leading to phylogenetic discordance across the genome and between populations …

Adaptive introgression in animals: examples and comparison to new mutation and standing variation as sources of adaptive variation

PW Hedrick - Molecular ecology, 2013 - Wiley Online Library
Adaptive genetic variation has been thought to originate primarily from either new mutation
or standing variation. Another potential source of adaptive variation is adaptive variants from …

Butterfly genome reveals promiscuous exchange of mimicry adaptations among species

Nature, 2012 - nature.com
The evolutionary importance of hybridization and introgression has long been debated.
Hybrids are usually rare and unfit, but even infrequent hybridization can aid adaptation by …

Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence

PJ Wittkopp, G Kalay - Nature Reviews Genetics, 2012 - nature.com
Cis-regulatory sequences, such as enhancers and promoters, control development and
physiology by regulating gene expression. Mutations that affect the function of these …

The loci of repeated evolution: a catalog of genetic hotspots of phenotypic variation

A Martin, V Orgogozo - Evolution, 2013 - academic.oup.com
What is the nature of the genetic changes underlying phenotypic evolution? We have
catalogued 1008 alleles described in the literature that cause phenotypic differences among …

Comparative studies of gene expression and the evolution of gene regulation

IG Romero, I Ruvinsky, Y Gilad - Nature Reviews Genetics, 2012 - nature.com
The hypothesis that differences in gene regulation have an important role in speciation and
adaptation is more than 40 years old. With the advent of new sequencing technologies, we …