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Strategies for tailoring functional microbial synthetic communities
Natural ecosystems harbor a huge reservoir of taxonomically diverse microbes that are
important for plant growth and health. The vast diversity of soil microorganisms and their …
important for plant growth and health. The vast diversity of soil microorganisms and their …
Phage-plasmids promote recombination and emergence of phages and plasmids
Phages and plasmids are regarded as distinct types of mobile genetic elements that drive
bacterial evolution by horizontal gene transfer. However, the distinction between both types …
bacterial evolution by horizontal gene transfer. However, the distinction between both types …
Toward Microbiome Engineering: expanding the repertoire of genetically tractable members of the human gut Microbiome
Genetic manipulation is necessary to interrogate the functions of microbes in their
environments, such as the human gut microbiome. Yet, the vast majority of human gut …
environments, such as the human gut microbiome. Yet, the vast majority of human gut …
Prediction of strain level phage–host interactions across the Escherichia genus using only genomic information
Predicting bacteriophage infection of specific bacterial strains promises advancements in
phage therapy and microbial ecology. Whether the dynamics of well-established phage …
phage therapy and microbial ecology. Whether the dynamics of well-established phage …
Phage-inducible chromosomal minimalist islands (PICMIs), a novel family of small marine satellites of virulent phages
R Barcia-Cruz, D Goudenège… - Nature …, 2024 - nature.com
Phage satellites are bacterial genetic elements that co-opt phage machinery for their own
dissemination. Here we identify a family of satellites, named Phage-Inducible Chromosomal …
dissemination. Here we identify a family of satellites, named Phage-Inducible Chromosomal …
Genomic epidemiology reveals multidrug resistant plasmid spread between Vibrio cholerae lineages in Yemen
F Lassalle, S Al-Shalali, M Al-Hakimi, E Njamkepo… - Nature …, 2023 - nature.com
Since 2016, Yemen has been experiencing the largest cholera outbreak in modern history.
Multidrug resistance (MDR) emerged among Vibrio cholerae isolates from cholera patients …
Multidrug resistance (MDR) emerged among Vibrio cholerae isolates from cholera patients …
Identification and characterization of thousands of bacteriophage satellites across bacteria
Bacteriophage–bacteria interactions are affected by phage satellites, elements that exploit
phages for transfer between bacteria. Satellites can encode defense systems, antibiotic …
phages for transfer between bacteria. Satellites can encode defense systems, antibiotic …
Exploring the diversity of anti-defense systems across prokaryotes, phages and mobile genetic elements
The co-evolution of prokaryotes, phages and mobile genetic elements (MGEs) has driven
the diversification of defense and anti-defense systems alike. Anti-defense proteins have …
the diversification of defense and anti-defense systems alike. Anti-defense proteins have …
[HTML][HTML] A comprehensive resource for exploring antiphage defense: DefenseFinder webservice, Wiki and databases
In recent years, a vast number of novel antiphage defense mechanisms were uncovered. To
facilitate the exploration of mechanistic, ecological, and evolutionary aspects related to …
facilitate the exploration of mechanistic, ecological, and evolutionary aspects related to …
Phage defence loci of Streptococcus thermophilus—tip of the anti-phage iceberg?<?mode longmeta?>
P Kelleher, G Ortiz Charneco, Z Kampff… - Nucleic Acids …, 2024 - academic.oup.com
Bacteria possess (bacterio) phage defence systems to ensure their survival. The
thermophilic lactic acid bacterium, Streptococcus thermophilus, which is used in dairy …
thermophilic lactic acid bacterium, Streptococcus thermophilus, which is used in dairy …