Ecological modelling approaches for predicting emergent properties in microbial communities

NI van den Berg, D Machado, S Santos… - Nature ecology & …, 2022 - nature.com
Recent studies have brought forward the critical role of emergent properties in sha**
microbial communities and the ecosystems of which they are a part. Emergent properties …

The assembly and dynamics of ecological communities in an ever‐changing world

O Godoy, F Soler‐Toscano, JR Portillo… - Ecological …, 2024 - Wiley Online Library
Alternative perspectives on the maintenance of biodiversity and the assembly of ecological
communities suggest that both processes cannot be investigated simultaneously. In this …

Emergent phases of ecological diversity and dynamics mapped in microcosms

J Hu, DR Amor, M Barbier, G Bunin, J Gore - Science, 2022 - science.org
From tropical forests to gut microbiomes, ecological communities host notably high numbers
of coexisting species. Beyond high biodiversity, communities exhibit a range of complex …

Diversity begets stability: Sublinear growth and competitive coexistence across ecosystems

IA Hatton, O Mazzarisi, A Altieri, M Smerlak - Science, 2024 - science.org
The worldwide loss of species diversity brings urgency to understanding how diverse
ecosystems maintain stability. Whereas early ecological ideas and classic observations …

Statistically learning the functional landscape of microbial communities

A Skwara, K Gowda, M Yousef… - Nature ecology & …, 2023 - nature.com
Microbial consortia exhibit complex functional properties in contexts ranging from soils to
bioreactors to human hosts. Understanding how community composition determines …

Coexistence in diverse communities with higher-order interactions

T Gibbs, SA Levin, JM Levine - Proceedings of the National Academy of …, 2022 - pnas.org
A central assumption in most ecological models is that the interactions in a community
operate only between pairs of species. However, two species may interactively affect the …

[HTML][HTML] The role of platform ecosystem configuration toward performance bifurcation

W Duan, A Eva, L Andrews, Y Liu - Journal of Innovation & Knowledge, 2024 - Elsevier
The prevalence of digital ecosystems and platforms underscores the need for a deeper
understanding of the factors that influence performance variations within these platforms …

Generalized lotka-volterra equations with random, nonreciprocal interactions: The typical number of equilibria

V Ros, F Roy, G Biroli, G Bunin, AM Turner - Physical Review Letters, 2023 - APS
We compute the typical number of equilibria of the generalized Lotka-Volterra equations
describing species-rich ecosystems with random, nonreciprocal interactions using the …

Many-species ecological fluctuations as a jump process from the brink of extinction

T Arnoulx de Pirey, G Bunin - Physical Review X, 2024 - APS
Highly diverse ecosystems exhibit a broad distribution of population sizes and species
turnover, where species at high and low abundances are exchanged over time. We show …

Incorporating heterogeneous interactions for ecological biodiversity

JI Park, DS Lee, SH Lee, HJ Park - Physical Review Letters, 2024 - APS
Understanding the behaviors of ecological systems is challenging given their multifaceted
complexity. To proceed, theoretical models such as Lotka-Volterra dynamics with random …