Haplotype blocks for genomic prediction: a comparative evaluation in multiple crop datasets

SE Weber, M Frisch, RJ Snowdon… - Frontiers in Plant …, 2023 - frontiersin.org
In modern plant breeding, genomic selection is becoming the gold standard for selection of
superior genotypes. The basis for genomic prediction models is a set of phenotyped lines …

Integrated multi‐omics analyses and genome‐wide association studies reveal prime candidate genes of metabolic and vegetative growth variation in canola

D Knoch, RC Meyer, MC Heuermann… - The Plant …, 2024 - Wiley Online Library
Genome‐wide association studies (GWAS) identified thousands of genetic loci associated
with complex plant traits, including many traits of agronomical importance. However …

Molecular genetic diversity and linkage disequilibrium structure of the Egyptian faba bean using Single Primer Enrichment Technology (SPET)

A Sallam, A Amro, AMI Mourad, A Rafeek, A Boerner… - BMC genomics, 2024 - Springer
Faba bean is an important legume crop. The genetic diversity among faba bean genotypes
is very important for the genetic improvement of target traits. A set of 128 fab bean genotypes …

Accurate prediction of quantitative traits with failed SNP calls in canola and maize

SE Weber, HS Chawla, L Ehrig, LT Hickey… - Frontiers in Plant …, 2023 - frontiersin.org
In modern plant breeding, genomic selection is becoming the gold standard to select
superior genotypes in large breeding populations that are only partially phenotyped. Many …

Long-Amplicon Single-Molecule Sequencing Reveals Novel, Trait-Associated Variants of VERNALIZATION1 Homoeologs in Hexaploid Wheat

M Makhoul, HS Chawla, B Wittkop, A Stahl… - Frontiers in Plant …, 2022 - frontiersin.org
The gene VERNALIZATION1 (VRN1) is a key controller of vernalization requirement in
wheat. The genome of hexaploid wheat (Triticum aestivum) harbors three homoeologous …

Frequent spontaneous structural rearrangements promote rapid genome diversification in a Brassica napus F1 generation

M Orantes-Bonilla, M Makhoul, HT Lee… - Frontiers in Plant …, 2022 - frontiersin.org
In a cross between two homozygous Brassica napus plants of synthetic and natural origin,
we demonstrate that novel structural genome variants from the synthetic parent cause …

Understanding R Gene Evolution in Brassica

F Zhang, TX Neik, T Wu, D Edwards, J Batley - Agronomy, 2022 - mdpi.com
Brassica crop diseases caused by various pathogens, including viruses, bacteria, fungi and
oomycetes, have devastating effects on the plants, leading to significant yield loss. This …

Frequent spontaneous structural rearrangements promote transgenerational genome diversification in Brassica napus

M Orantes-Bonilla, M Makhoul, HT Lee, HS Chawla… - Biorxiv, 2022 - biorxiv.org
In F1 offspring from a cross between two Brassica napus plants of synthetic and natural
origin, we demonstrate the occurrence of novel transgenerational structural genome …

4 The QTL Identification and

J Jiang - Allele Mining for Genomic Designing of Oilseed Crops, 2024 - books.google.com
Rapeseed (Brassica napus L., AACC, 2n= 38) is a polyploid formed~ 7,500 years ago,
which was derived from natural hybridization between two diploid species, B. rapa (AA, 2n …

Identifying quantitative trait loci (QTL) associated with lodging resistance in Brassica napus L.

HT Luu - 2024 - mspace.lib.umanitoba.ca
Brassica napus L.(canola and rapeseed) is the world's second-largest oilseed crop, and it
has significant economic importance to Canadian agriculture. However, lodging in canola is …