Myofilament-associated proteins with intrinsic disorder (MAPIDs) and their resolution by computational modeling
The cardiac sarcomere is a cellular structure in the heart that enables muscle cells to
contract. Dozens of proteins belong to the cardiac sarcomere, which work in tandem to …
contract. Dozens of proteins belong to the cardiac sarcomere, which work in tandem to …
A model study of sequential enzyme reactions and electrostatic channeling
We study models of two sequential enzyme-catalyzed reactions as a basic functional
building block for coupled biochemical networks. We investigate the influence of enzyme …
building block for coupled biochemical networks. We investigate the influence of enzyme …
Structural and dynamic basis of substrate permissiveness in hydroxycinnamoyltransferase (HCT)
Substrate permissiveness has long been regarded as the raw materials for the evolution of
new enzymatic functions. In land plants, hydroxycinnamoyltransferase (HCT) is an essential …
new enzymatic functions. In land plants, hydroxycinnamoyltransferase (HCT) is an essential …
Quantifying the influence of the crowded cytoplasm on small molecule diffusion
PM Kekenes-Huskey, CE Scott… - The Journal of Physical …, 2016 - ACS Publications
Cytosolic crowding can influence the thermodynamics and kinetics of in vivo chemical
reactions. Most significantly, proteins and nucleic acid crowders reduce the accessible …
reactions. Most significantly, proteins and nucleic acid crowders reduce the accessible …
[책][B] 4D Printing, Volume 1: Between Disruptive Research and Industrial Applications
F Demoly, JC André - 2022 - books.google.com
Any time objects and their (self-) organization are to be put into use, their models and
methods of thinking as well as their designing and manufacturing need to be reinvented. 4D …
methods of thinking as well as their designing and manufacturing need to be reinvented. 4D …
Structural changes beyond the EF-hand contribute to apparent calcium binding affinities: insights from parvalbumins
Members of the parvalbumin (PV) family of calcium (Ca2+) binding proteins (CBPs) share a
relatively high level of sequence similarity. However, their Ca2+ affinities and selectivities …
relatively high level of sequence similarity. However, their Ca2+ affinities and selectivities …
Computational modeling of subcellular transport and signaling
Highlights•Electron and light microscopy yield 3D reconstructions of signaling
microdomains.•Imaging techniques provide further high-resolution structural data suitable …
microdomains.•Imaging techniques provide further high-resolution structural data suitable …
Co-localization and confinement of ecto-nucleotidases modulate extracellular adenosine nucleotide distributions
Nucleotides comprise small molecules that perform critical signaling roles in biological
systems. Adenosine-based nucleotides, including adenosine tri-, di-, and mono-phosphate …
systems. Adenosine-based nucleotides, including adenosine tri-, di-, and mono-phosphate …
Influence of neighboring reactive particles on diffusion-limited reactions
C Eun, PM Kekenes-Huskey… - The Journal of Chemical …, 2013 - pubs.aip.org
Competition between reactive species is commonplace in typical chemical reactions.
Specifically the primary reaction between a substrate and its target enzyme may be altered …
Specifically the primary reaction between a substrate and its target enzyme may be altered …
Molecular and subcellular-scale modeling of nucleotide diffusion in the cardiac myofilament lattice
Contractile function of cardiac cells is driven by the sliding displacement of myofilaments
powered by the cycling myosin crossbridges. Critical to this process is the availability of ATP …
powered by the cycling myosin crossbridges. Critical to this process is the availability of ATP …