Highlights•Protein Language Models (pLMs) tap into large unlabeled data to transform
protein science.•pLMs boost protein structure and function prediction performance and …

Large language models (LLMs) are having transformative impacts across a wide range of
scientific fields, particularly in the biomedical sciences. Just as the goal of natural language …

ProTrek redefines protein exploration by seamlessly fusing sequence, structure, and natural
language function (SSF) into an advanced tri-modal language model. Through contrastive …

Protein sequence similarity search is fundamental to genomics research, but current
methods are typically not able to consider crucial genomic context information that can be …

Genomic Language Models (GLMs), which learn from nucleotide sequences, have become
essential tools for understanding the principles of life and have demonstrated outstanding …