Building mountain biodiversity: Geological and evolutionary processes

C Rahbek, MK Borregaard, A Antonelli, RK Colwell… - Science, 2019 - science.org
Mountain regions are unusually biodiverse, with rich aggregations of small-ranged species
that form centers of endemism. Mountains play an array of roles for Earth's biodiversity and …

Neogene history of the Amazonian flora: a perspective based on geological, palynological, and molecular phylogenetic data

C Hoorn, LG Lohmann, LM Boschman… - Annual Review of …, 2023 - annualreviews.org
The Amazon hosts one of the largest and richest rainforests in the world, but its origins
remain debated. Growing evidence suggests that geodiversity and geological history played …

Frog phylogeny: a time-calibrated, species-level tree based on hundreds of loci and 5,242 species

DM Portik, JW Streicher, JJ Wiens - Molecular Phylogenetics and Evolution, 2023 - Elsevier
Large-scale, time-calibrated phylogenies from supermatrix studies have become crucial for
evolutionary and ecological studies in many groups of organisms. However, in frogs (anuran …

Hidden hotspots of amphibian biodiversity in China

W Xu, YH Wu, WW Zhou, HM Chen, BL Zhang… - Proceedings of the …, 2024 - pnas.org
Identifying and protecting hotspots of endemism and species richness is crucial for
mitigating the global biodiversity crisis. However, our understanding of spatial diversity …

[PDF][PDF] Phylogenetic comparative methods: learning from trees

L Harmon - 2019 - ecoevorxiv.org
Evolution is happening all around us. In many cases–lately, due to technological advances
in molecular biology–scientists can now describe the evolutionary process in exquisite …

Glassfrogs of Ecuador: diversity, evolution, and conservation

JM Guayasamin, DF Cisneros-Heredia, RW McDiarmid… - Diversity, 2020 - mdpi.com
Glassfrogs (family: Centrolenidae) represent a fantastic radiation (~ 150 described species)
of Neotropical anurans that originated in South America and dispersed into Central America …

[หนังสือ][B] Phylogenetic comparative methods

L Harmon - 2019 - scholar.archive.org
Evolution is happening all around us. In many cases–lately, due to technological advances
in molecular biology–scientists can now describe the evolutionary process in exquisite …

Rapid Radiation and Rampant Reticulation: Phylogenomics of South American Liolaemus Lizards

D Esquerré, JS Keogh, D Demangel… - Systematic …, 2022 - academic.oup.com
Understanding the factors that cause heterogeneity among gene trees can increase the
accuracy of species trees. Discordant signals across the genome are commonly produced …

Pulled diversification rates, lineages-through-time plots, and modern macroevolutionary modeling

AJ Helmstetter, S Glemin, J Käfer… - Systematic …, 2022 - academic.oup.com
Estimating time-dependent rates of speciation and extinction from dated phylogenetic trees
of extant species (timetrees), and determining how and why they vary, is key to …

Estimating diversification rates for higher taxa: BAMM can give problematic estimates of rates and rate shifts

ALS Meyer, JJ Wiens - Evolution, 2018 - academic.oup.com
Estimates of diversification rates are invaluable for many macroevolutionary studies.
Recently, an approach called BAMM (Bayesian Analysis of Macro-evolutionary Mixtures) …