Similarities and differences in the associations of biological entities among species can
provide us with a better understanding of evolutionary relationships. Often the evolution of …

In the-omics era, bioinformatics technologies allowed the development of several
approaches useful to analyze biological systems. To provide a deep insight into a biological …

Analogous to genomic sequence alignment that allows for across-species transfer of
biological knowledge between conserved sequence regions, biological network alignment …

Every alignment algorithm consists of two orthogonal components: an objective function M
measuring the quality of an alignment, and a search algorithm that explores the space of …

Motivation Despite the advances in sequencing technology, massive proteins with known
sequences remain functionally unannotated. Biological network alignment (NA), which aims …

In bioinformatics, networks are used for modeling biological objects (eg, genes, proteins,
drugs) as nodes, and their interactions as edges. A multilayer network is used for modeling …

Network alignment or graph matching is the classic problem of finding matching vertices
between two graphs with applications in network de-anonymization and bioinformatics …