Understanding jargon: Combining extraction and generation for definition modeling

J Huang, H Shao, KCC Chang, J **ong… - arxiv preprint arxiv …, 2021 - arxiv.org
Can machines know what twin prime is? From the composition of this phrase, machines may
guess twin prime is a certain kind of prime, but it is still difficult to deduce exactly what twin …

Textomics: A dataset for genomics data summary generation

MC Wang, Z Liu, S Wang - … of the 60th Annual Meeting of the …, 2022 - aclanthology.org
Summarizing biomedical discovery from genomics data using natural languages is an
essential step in biomedical research but is mostly done manually. Here, we introduce …

Seed-guided topic discovery with out-of-vocabulary seeds

Y Zhang, Y Meng, X Wang, S Wang, J Han - arxiv preprint arxiv …, 2022 - arxiv.org
Discovering latent topics from text corpora has been studied for decades. Many existing
topic models adopt a fully unsupervised setting, and their discovered topics may not cater to …

CodeTaxo: Enhancing Taxonomy Expansion with Limited Examples via Code Language Prompts

Q Zeng, Y Bai, Z Tan, Z Wu, S Feng, M Jiang - arxiv preprint arxiv …, 2024 - arxiv.org
Taxonomies play a crucial role in various applications by providing a structural
representation of knowledge. The task of taxonomy expansion involves integrating emerging …

Graph-in-graph network for automatic gene ontology description generation

F Liu, B Yang, C You, X Wu, S Ge, A Woicik… - Proceedings of the 28th …, 2022 - dl.acm.org
Gene Ontology (GO) is the primary gene function knowledge base that enables
computational tasks in biomedicine. The basic element of GO is a term, which includes a set …

Towards the Machine Translation of Scientific Neologisms

P Lerner, F Yvon - 2025 - hal.science
Scientific research continually discovers and invents new concepts, which are then referred
to by new terms, neologisms, or neonyms in this context. As the vast majority of publications …

Pathway2text: Dataset and method for biomedical pathway description generation

J Yang, Z Liu, M Zhang, S Wang - Findings of the Association for …, 2022 - aclanthology.org
Biomedical pathways have been extensively used to characterize the mechanism of
complex diseases. One essential step in biomedical pathway analysis is to curate the …

[PDF][PDF] Completing Taxonomies with Relation-Aware Mutual Attentions

Q Zeng, Z Zhang, J Lin, M Jiang - KDD, 2023 - mlgworkshop.org
Taxonomies serve many applications with a structural representation of knowledge. To
incorporate emerging concepts into existing taxonomies, the task of taxonomy completion …

MetaFill: Text Infilling for Meta-Path Generation on Heterogeneous Information Networks

Z Liu, K Duan, J Yang, H Xu, M Zhang… - arxiv preprint arxiv …, 2022 - arxiv.org
Heterogeneous Information Network (HIN) is essential to study complicated networks
containing multiple edge types and node types. Meta-path, a sequence of node types and …

Vers la traduction automatique des néologismes scientifiques

P Lerner, F Yvon - Actes de JEP-TALN-RECITAL 2024. 31ème …, 2024 - inria.hal.science
La recherche scientifique découvre et invente continuellement de nouveaux concepts qui
sont alors désignés par de nouveaux termes, des néologismes, ou néonymes dans ce …