High-throughput and single-cell T cell receptor sequencing technologies
T cells express T cell receptors (TCRs) composed of somatically recombined TCRα and
TCRβ chains, which mediate recognition of major histocompatibility complex (MHC)–antigen …
TCRβ chains, which mediate recognition of major histocompatibility complex (MHC)–antigen …
The dormant cancer cell life cycle
The success of targeted therapies and immunotherapies has created optimism that cancers
may be curable. However, not all patients respond, drug resistance is common and many …
may be curable. However, not all patients respond, drug resistance is common and many …
Orchestrating single-cell analysis with Bioconductor
Recent technological advancements have enabled the profiling of a large number of
genome-wide features in individual cells. However, single-cell data present unique …
genome-wide features in individual cells. However, single-cell data present unique …
Immunosenescence and human vaccine immune responses
The age-related dysregulation and decline of the immune system—collectively termed
“immunosenescence”—has been generally associated with an increased susceptibility to …
“immunosenescence”—has been generally associated with an increased susceptibility to …
CellTalkDB: a manually curated database of ligand–receptor interactions in humans and mice
Cell–cell communications in multicellular organisms generally involve secreted ligand–
receptor (LR) interactions, which is vital for various biological phenomena. Recent …
receptor (LR) interactions, which is vital for various biological phenomena. Recent …
The single-cell sequencing: new developments and medical applications
Single-cell sequencing technologies can be used to detect the genome, transcriptome and
other multi-omics of single cells. They can show the differences and evolutionary …
other multi-omics of single cells. They can show the differences and evolutionary …
The tumour microenvironment shapes innate lymphoid cells in patients with hepatocellular carcinoma
Objective Hepatocellular carcinoma (HCC) represents a typical inflammation-associated
cancer. Tissue resident innate lymphoid cells (ILCs) have been suggested to control tumour …
cancer. Tissue resident innate lymphoid cells (ILCs) have been suggested to control tumour …
Data denoising with transfer learning in single-cell transcriptomics
Single-cell RNA sequencing (scRNA-seq) data are noisy and sparse. Here, we show that
transfer learning across datasets remarkably improves data quality. By coupling a deep …
transfer learning across datasets remarkably improves data quality. By coupling a deep …
Recent advances in single cell manipulation and biochemical analysis on microfluidics
D Gao, F **, M Zhou, Y Jiang - Analyst, 2019 - pubs.rsc.org
Single cell analysis has become of great interest with unprecedented capabilities for the
systematic investigation of cell-to-cell variation in large populations. Rapid and multi …
systematic investigation of cell-to-cell variation in large populations. Rapid and multi …
A niche-dependent myeloid transcriptome signature defines dormant myeloma cells
The era of targeted therapies has seen significant improvements in depth of response,
progression-free survival, and overall survival for patients with multiple myeloma. Despite …
progression-free survival, and overall survival for patients with multiple myeloma. Despite …