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Quantitative mass spectrometry-based proteomics: an overview
S Rozanova, K Barkovits, M Nikolov, C Schmidt… - Quantitative methods in …, 2021 - Springer
In recent decades, mass spectrometry has moved more than ever before into the front line of
protein-centered research. After being established at the qualitative level, the more …
protein-centered research. After being established at the qualitative level, the more …
[PDF][PDF] Preterm birth: causes, consequences, and prevention
RE Behrman, AS Butler - 2007 - cds.psych.ucla.edu
Although individual behaviors have not been proven to have a strong influence on the risk of
preterm birth, consistent evidence suggests that a constellation of favorable lifestyle factors …
preterm birth, consistent evidence suggests that a constellation of favorable lifestyle factors …
Proteomics by mass spectrometry: approaches, advances, and applications
Mass spectrometry (MS) is the most comprehensive and versatile tool in large-scale
proteomics. In this review, we dissect the overall framework of the MS experiment into its key …
proteomics. In this review, we dissect the overall framework of the MS experiment into its key …
Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease
Crohn's disease (CD) is an inflammatory bowel disease of complex etiology, although
dysbiosis of the gut microbiota has been implicated in chronic immune-mediated …
dysbiosis of the gut microbiota has been implicated in chronic immune-mediated …
Selective identification of newly synthesized proteins in mammalian cells using bioorthogonal noncanonical amino acid tagging (BONCAT)
In both normal and pathological states, cells respond rapidly to environmental cues by
synthesizing new proteins. The selective identification of a newly synthesized proteome has …
synthesizing new proteins. The selective identification of a newly synthesized proteome has …
[HTML][HTML] Reproducibility, specificity and accuracy of relative quantification using spectral library-based data-independent acquisition
K Barkovits, S Pacharra, K Pfeiffer, S Steinbach… - Molecular & Cellular …, 2020 - Elsevier
Currently data-dependent acquisition (DDA) is the method of choice for mass spectrometry-
based proteomics discovery experiments, but data-independent acquisition (DIA) is steadily …
based proteomics discovery experiments, but data-independent acquisition (DIA) is steadily …
Small changes huge impact: the role of protein posttranslational modifications in cellular homeostasis and disease
TM Karve, AK Cheema - Journal of amino acids, 2011 - Wiley Online Library
Posttranslational modifications (PTMs) modulate protein function in most eukaryotes and
have a ubiquitous role in diverse range of cellular functions. Identification, characterization …
have a ubiquitous role in diverse range of cellular functions. Identification, characterization …
Clinical biomarkers in drug discovery and development
R Frank, R Hargreaves - Nature reviews Drug discovery, 2003 - nature.com
Biomarkers enable the characterization of patient populations and quantitation of the extent
to which new drugs reach intended targets, alter proposed pathophysiological mechanisms …
to which new drugs reach intended targets, alter proposed pathophysiological mechanisms …
[HTML][HTML] Cln3 activates G1-specific transcription via phosphorylation of the SBF bound repressor Whi5
G1-specific transcriptional activation by Cln3/CDK initiates the budding yeast cell cycle. To
identify targets of Cln3/CDK, we analyzed the SBF and MBF transcription factor complexes …
identify targets of Cln3/CDK, we analyzed the SBF and MBF transcription factor complexes …
The myeloperoxidase product hypochlorous acid oxidizes HDL in the human artery wall and impairs ABCA1-dependent cholesterol transport
Although oxidatively damaged lipoproteins are implicated in vascular injury, there is little
information regarding the role of high-density lipoprotein (HDL) oxidation in atherogenesis …
information regarding the role of high-density lipoprotein (HDL) oxidation in atherogenesis …